Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00823 ATGGAGAAGATGATGGCCAATCGAGAAGCAGTAAACGGCTTCAGTGACGATATTCTTATCAACATTCTGTCAAGACTAGATGCCTTGTCCTTCGCAAGTTCAGCGTGTGTAAATAAAACATGGCGCAGGGTCTCCAATCAAATTCTCAGAGGTCCCAAGATTGCGTCTGCAGTCTCCCTCAACCCCTCTACCACATATCATGAAACTGGGTCACTCTCATATCAAACTGCAATGGCTGTTGTTTGTGTTGAGGGATGTTCTTTTCTTTTAGCTTCTGCTGTTGGTTTAAAGGCCAACCAGGGTGTTGGGCTTATTGGGCCTGATCCTTCTAATCTGGTGACCATTATGGCCTGCAAAAGGATAGACCCAGAAACTGGAGCATGCTTGGGTGAAAAATTGCAAAACCCAAAAATCTGGCTTTTTAGCTTCTGCTGTTGGTTTAAGGGGGGTAATCTTGCAAAGCTCATACCTCATTCTTTTGGGCTTGCTTGTCCTTCTGGCATTGGGCTTTTCATTGCCTTTGTGGGCTTGCAAGCCAACCAGGGTGTTGGGCTTATTGGGCCTGATCCTTCTAATCTGGTGACCATTATGGTCTTGCAAAAGGATAGACCCAGAAACTGGAGCATGCTTGGAAGGGAAGTTTGGGAGGCCTTGGCTACATTGTTCTATGTTGATGTGCTTGCCATCACTGGCACCATGTATACCATGGCAGAGATTGGTGGGTTTTTGGATGAAAAGGGAAATTTTGAAGGGGAATACGTGGCTTACATGGTTGATGTAGCTGGCACCATTATGGGTTCTACGTTGGGTGTGACAACCACAGCAACATTTGTAGAATCATCAGCTGGATTGAGAGAAGGGGGTCGTACAGGATTAACGGCTGTGATCCTTGGATGGTTTGCTATGGGTTGGAAGTTGTCTCAATTGGCTTGGCAATTCAGAGACCTTATGTTTAACAACCAGCAACAAAGGTCCAAAGGGCAGATTATATGGTTCTCAGTGATTTGGTCTATTTGGTTAGCAAGGAACCAATCAGTATTCCATGGGAACCAGGGTGCTGTAGGTGAGGTTCTTGACAGGGTGCTGGGCAAGCCAATTCGTCCAGACTTCGGTATTGCTTGCATCAGTCAAGCACATGACTTGAGATTAACTCACGATCTGCTTACAGACATACTTGGAGCCAGGACTCCTTTGGTTACTTATATTTCCCATGGAGTGATGGGCAAGGATACTCTCACAAATGAATTAAAAGAAGTGCAACAGGAGTATGTTGATTCCAGCTGTCCTCATCCTTGTGAGTCTAATGCAAATCAAGGGATGGTTTTGGTAGTTGGATATTTGCCTGGACTCAAAATTGATGCCATACCATTATTTCATCCAAAGGACCCTGAAAATACCATGCCTGACTATGACAAGTTTGTCAGAGAAATCAAGGCATACACAGCTGCAGCTTCCAGCTATGAATTCCCCAAGGCCATTATCATGTTTGGAGATCGTAACAGTAACACGAAATACGTAGTTGCAAAATTGGATCATTCCATGCCTAAGGACACTGTCATCATTGGCGATGCTGGTGGTTGCTTCTTGTTTAACGGTATCAACCATATAATAAGTGCAGATTTATACACATTTGATGCTGTAACTCTCGTATTTGCTCAAGATCAAAACAAGTCTCCCGATGTTGGGGAAACTGAATTTCATGTTATTATGGCTGGAGGTTTAATGCAGTTCGAGCCCCGATTCGAGGTGACTAGTGTAGCAATAAAACCGTTACAGAAATGCTCCTGGATCAGTGCTAAGGTGGAAGGACTGGATGTCCTTTTGAATATAGACACTGTATTGGATACTATTGACCAGATGGTTAATAATGATGAACCCCCTAACTTGTATATTGCGGTAACCCAAAATAGACACTACTATGGGGAAAGGAAGAGATTGGGAACATCAACGGCCTTCTATGAAGTCCGGGGGGGTGGAGGTCCTTCCATTTTCATTGACGGTATTGGTGTAAGGCCCGGTGATTCCTTCGTATTCTACCACAGTGACGTAGAAACTGCACACACCTCCAATGCCATTGCTTTTGAAAAGTTAGAGATCGTGAAGCAGAACACAAGGAACAATGATGGCGTTTTTGGTGGTTTGATTTTCTCTTGCCATCATCGCGGAGAATCGTATTTCAAACAACCCAACGTTGATATCTTGCCATTCTCTCTTAACTTTCCTAAGGTGCCAGTAGCTGGTATGTTCTGCAAGGGGGAGATTGGGCGTGGCTCCTCTTGCTTTATTAGAGAAGAGGAGTATCAACAACAATGCCCTGCTCATTGTTGTATTCACGCTGGAAGTGTCATTTATTTAGTCATGTCTTATATTCCCCCTACATCTGTGTAG 2388 0.4418 MEKMMANREAVNGFSDDILINILSRLDALSFASSACVNKTWRRVSNQILRGPKIASAVSLNPSTTYHETGSLSYQTAMAVVCVEGCSFLLASAVGLKANQGVGLIGPDPSNLVTIMACKRIDPETGACLGEKLQNPKIWLFSFCCWFKGGNLAKLIPHSFGLACPSGIGLFIAFVGLQANQGVGLIGPDPSNLVTIMVLQKDRPRNWSMLGREVWEALATLFYVDVLAITGTMYTMAEIGGFLDEKGNFEGEYVAYMVDVAGTIMGSTLGVTTTATFVESSAGLREGGRTGLTAVILGWFAMGWKLSQLAWQFRDLMFNNQQQRSKGQIIWFSVIWSIWLARNQSVFHGNQGAVGEVLDRVLGKPIRPDFGIACISQAHDLRLTHDLLTDILGARTPLVTYISHGVMGKDTLTNELKEVQQEYVDSSCPHPCESNANQGMVLVVGYLPGLKIDAIPLFHPKDPENTMPDYDKFVREIKAYTAAASSYEFPKAIIMFGDRNSNTKYVVAKLDHSMPKDTVIIGDAGGCFLFNGINHIISADLYTFDAVTLVFAQDQNKSPDVGETEFHVIMAGGLMQFEPRFEVTSVAIKPLQKCSWISAKVEGLDVLLNIDTVLDTIDQMVNNDEPPNLYIAVTQNRHYYGERKRLGTSTAFYEVRGGGGPSIFIDGIGVRPGDSFVFYHSDVETAHTSNAIAFEKLEIVKQNTRNNDGVFGGLIFSCHHRGESYFKQPNVDILPFSLNFPKVPVAGMFCKGEIGRGSSCFIREEEYQQQCPAHCCIHAGSVIYLVMSYIPPTSV* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00823 795 Pfam F-box domain 15 46 IPR001810 GO:0005515
Rops10g00823 795 Pfam FIST N domain 369 586 IPR013702 -
Rops10g00823 795 SUPERFAMILY F-box domain 9 46 IPR036047 GO:0005515
Rops10g00823 795 PANTHER F-BOX ONLY PROTEIN 22 3 64 - -
Rops10g00823 795 Pfam FIST C domain 670 756 IPR019494 -
Rops10g00823 795 SMART FIST_C_2 613 757 IPR019494 -
Rops10g00823 795 SMART fbox_2 14 54 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00823 Rops-Chr10 18859903 18868177 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00823 - - pcin:129309015 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00823 10 18859903 18868177 Rops10g00823 10 18859903 18868177 ECH
Rops10g00823 10 18859903 18868177 Rops2g00600 2 8556050 8562451 PCT