Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00588 ATGGTTTCTAGTCAATTAAGATTCAGCAAAGGAGGTGCAGCAAAGTCCTTCGTTCCATTCAAGATGGCGTTGCAAGAACAGTTAGACAGATTCAAGAGGCAGCAGGAGAAGTGTCAGTCAACACTGTCGAGCATTGCAGCCAGCAAGAACGCAACCCGAAAACCCGTTGCTCCAGTAGCTTCAGTCAATGGAAGAAATCCAGCCCCTGCTGTCAAATTCTCAAACGACACTGAGAGGCTTCAGCATATTAACAGCATACGCAAAGCCCCTGTTGGTGCTCAGATGAAGCGTGTTATTGATATCCTCTTAGAGACACGACAAGCTTTCACACCAGAGCAAATAAATGAAGCGTGCTATGTTGACATGAGGGCTAACAAAGATGTTTTTGACAATCTGAGGAAAAACCCAAAAGTAAACTATGATGGGCAGCGATTCTCTTACAAGTCAAAGTATGGCCTTAAGGACAAAACTGAGCTTCTTCAACTGATACGTAAGTATCCAGAGGGCATTGCTGTTATTGACTTAAAGGATGCTTACCCCACTGTGATGGAAGATTTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCCTACCCTAATGACCCCAAAGTGCACATTAAGGTGGATGATGACCTAAAACAGCTTTTCCGGAGTATCGAATTGCCCCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCCGCTACCAACACTGCCAAGAGGAGGAGCGCTGCACAAATTCAAGGCATTTCTTCCAAGTCTAAGCCCAAGAAGAAGAAGAGTGAGATCAGCAAGAGAACCAAGCTGACCAATGCCCATCTTCCAGAGCTTTTTCAGAACTTAAACAATTCCTGA 903 0.4452 MVSSQLRFSKGGAAKSFVPFKMALQEQLDRFKRQQEKCQSTLSSIAASKNATRKPVAPVASVNGRNPAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDILLETRQAFTPEQINEACYVDMRANKDVFDNLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGIAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISSKSKPKKKKSEISKRTKLTNAHLPELFQNLNNS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00588 300 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 79 154 IPR003166 GO:0006367
Rops2g00588 300 MobiDBLite consensus disorder prediction 245 300 - -
Rops2g00588 300 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 22 298 IPR016656 GO:0005673|GO:0006367
Rops2g00588 300 Coils Coil 21 41 - -
Rops2g00588 300 Pfam TFIIE beta subunit core domain 93 151 IPR003166 GO:0006367
Rops2g00588 300 MobiDBLite consensus disorder prediction 247 268 - -
Rops2g00588 300 Pfam TFA2 Winged helix domain 2 154 211 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00588 Rops-Chr2 8450626 8456072 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00588 K03137 - gmx:100802433 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00588 2 8450626 8456072 Rops2g00588 2 8450626 8456072 ECH
Rops1g02176 1 43300731 43306009 Rops2g00588 2 8450626 8456072 PCT