Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02176 ATGGCGTTGCAAGGGAAGTTAGAAAGATTTAAAAAGCAGCAAGAGAAGTGTCAATCAAGCCTTTCGAGCATTGCAGCAAACAAGGCTGCATCTGCGCCATCCAATCATGTTGCTGTCAAATTCTCAAACGATACAGAGAGACTTCAACATATTAACAGTATTCGCAAAGCCCCTGTAGGAGCTCAGATGAAGCGTGTTATTGATCTCCTATTTGAGACTCGACAGGCTTTTACACTAGCGCAAATAAATGATGCATGCTATGTGGACATGAAAGCTAACAAAGATGTTTTTGACAATATGAGGAAAAACCCAAAAGTCAAATACGACGGAGAAAGATTCTCTTACAAGTCGAAACATGACGTCAGGGACAAAAGTCAGCTGCTTTTCCTGATACGTAAGTTTCCAGAGGGCATTGCTGTTATTGACCTAAAGGATGCTTACCCAACTGTGATGGAGGACTTGCAGGCTATGAAAGCTGCCAGGGAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGATATTGCTTACCCTAATGATCCTAAAGTGCCAATTAAAGTGGATGATGACCTAAAACAGCTTTTTCGGGGGATTGAATTGCCTCGTGATATGCTTGATATAGAGAAAGATCTCTTAAAAAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCAGCGCAAATGGAAGGCATTCCCTCCAAGCCTAAACCTAAGAAGAAGAAGAATGAAATCAGCAAGAGGACCAAGCTGACTAATGCCCATCTTCCAGAGCTTTTTCAGAACTTAAACAATTCCTGA 807 0.4201 MALQGKLERFKKQQEKCQSSLSSIAANKAASAPSNHVAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQAFTLAQINDACYVDMKANKDVFDNMRKNPKVKYDGERFSYKSKHDVRDKSQLLFLIRKFPEGIAVIDLKDAYPTVMEDLQAMKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIEKDLLKNGMKPATNTAKRRSAAQMEGIPSKPKPKKKKNEISKRTKLTNAHLPELFQNLNNS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02176 268 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 47 122 IPR003166 GO:0006367
Rops1g02176 268 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 266 IPR016656 GO:0005673|GO:0006367
Rops1g02176 268 Pfam TFA2 Winged helix domain 2 122 179 IPR040501 -
Rops1g02176 268 MobiDBLite consensus disorder prediction 217 268 - -
Rops1g02176 268 Pfam TFIIE beta subunit core domain 61 121 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02176 Rops-Chr1 43300731 43306009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02176 K03137 - gmx:100802433 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02176 1 43300731 43306009 Rops2g00588 2 8450626 8456072 PCT