Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00579 ATGGCCAAGGTTTACCCTCAAGAACCCACATCCTCTCCATGCCTCACTTCTAAAAGAGAAACATATACTCTATGGATGAAATCACTTGTTTTCCACTCTAATGGTTGCACTGTCTATGATTCAAATGGTGACATAGTTTATCGAGTTGATAACTATGACAGAAAGGGTAGAAGAGAAGTTAACCTCATGGATCTACGAGGCAAAGTTCTCTGCACCATAAAGAAGAGATTACTAGCTCTTGGATGTTGGGAAGGTCACAGATATTGCAGCAATTCTAATTGTAGAAGCCAGGAACAACCATGGTTTCAAGTTAAAAGATGTAATCAAATGATCACAGGGAAAGTAGCATGTCAAATCACAGTGGGGTGTCAAAAGTACTGCATAGTAAGAATCAGTGGCAAAGCAGCAGCATTTAGGATAGAAAACAAAGATGGACAGATAATTGCAGAGGCAAAGCAAAAGCACTCACCATCAGGGGTTGTGTTGAGTAATGATGTTCTAACATTGGATTTGGCTGCTGGCACGGATCATTCCCTTATAATGGCTTTGGTCACAGTGTACGGATTGATATGTGGGATAATGTAA 585 0.4034 MAKVYPQEPTSSPCLTSKRETYTLWMKSLVFHSNGCTVYDSNGDIVYRVDNYDRKGRREVNLMDLRGKVLCTIKKRLLALGCWEGHRYCSNSNCRSQEQPWFQVKRCNQMITGKVACQITVGCQKYCIVRISGKAAAFRIENKDGQIIAEAKQKHSPSGVVLSNDVLTLDLAAGTDHSLIMALVTVYGLICGIM* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00579 194 PANTHER - 20 191 IPR007612 -
Rops2g00579 194 Pfam LURP-one-related 10 186 IPR007612 -
Rops2g00579 194 Gene3D - 12 192 IPR038595 -
Rops2g00579 194 SUPERFAMILY Tubby C-terminal domain-like 11 191 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00579 Rops-Chr2 8362865 8363912 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00579 - - pvu:PHAVU_002G287800g 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00579 2 8362865 8363912 Rops2g00579 2 8362865 8363912 ECH
Rops1g02179 1 43341279 43342207 Rops2g00579 2 8362865 8363912 PCT