Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02179 ATGGCCAAGGTTTATCCTCAAGAACAAGAACCCACATCCTCTTCTTGCATGATCTGTAGACGAGAAACATATACCCTTTGGATGAAATCACTTGTCTTCCACTCCAATGGTTGCACTATGTATGATTCAAATGGTGAAATCGTTTATCGCGTTGATAACTATGATACAAAGGGTAGAAGAGAAGTTAACCTTATGGATCTGCGAGGCAGAGTTCTCTGTACCATACAAAAGAGGCTACTTGCTTTTGGACGTTGGGATGTCTACAGATGCACTGATTCCAACTGTAGAAGTCAACTGAAGCCATGGTTTCAGGTTAAAAGATGTTATAAGATGATGAAGGGAAAAGTGGCCTGCCAGATTACAGTGGAGTGCCAAAAGTACTGCATACAGAGAATCAGTGGCAAAACAGCATTTAGGATAATCGACATAAATGGAGTCATAATTGCCAATGCAAAGCAAAAGCACTCGTCTTCGGGGATTGTACTGGGTAATGATGTTATAACGTTGGATGTGGAGGCCAACATAGATCACTCTCTGATAATGGCTTTTGTCACTGTGTTCGGATTAATCTGTGGCAGAATATAA 585 0.4103 MAKVYPQEQEPTSSSCMICRRETYTLWMKSLVFHSNGCTMYDSNGEIVYRVDNYDTKGRREVNLMDLRGRVLCTIQKRLLAFGRWDVYRCTDSNCRSQLKPWFQVKRCYKMMKGKVACQITVECQKYCIQRISGKTAFRIIDINGVIIANAKQKHSSSGIVLGNDVITLDVEANIDHSLIMAFVTVFGLICGRI* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02179 194 SUPERFAMILY Tubby C-terminal domain-like 20 191 IPR025659 -
Rops1g02179 194 Gene3D - 14 193 IPR038595 -
Rops1g02179 194 Pfam LURP-one-related 14 186 IPR007612 -
Rops1g02179 194 PANTHER - 22 191 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02179 Rops-Chr1 43341279 43342207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02179 - - gmx:100815833 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02179 1 43341279 43342207 Rops2g00579 2 8362865 8363912 PCT