Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00565 ATGGCTGTTATTTCACGAATTGCTTCTTCACCTTACTCTCTGCGCCATGACTTCATACGAAATAAGTTCGATGGTTCAACTGTTAGGAGGAATACCTCATTTGCTGGTAACTATATCTCTTCATGGAATTCGCAGAAGAGGATTGTTGCTGGTGTTGGATGTAAACGGTGTCGTAGGGTAATTGTTGCTGCCGGTCCTCCCACTGAAGATGCTGTGGTTGCTACTCAACCACTTACGAAGCAGGATCTTGTTGATTATCTTGCTTCCGGTTGTAAGCCCAAGGATAAATGGAGAATAGGTACTGAACATGAGAAATTTGGTTTTGAGTTTGGAAGCTTGCGTCCTATGAAGTATGAGCAAATAGCAGAATTGCTCAATGGCATTGCTGAGAGATTTGACTGGGATAAAGTAATGGAAGGTGATAAAATAATTGGCCTCAAACAGGGGAAGCAGAGCATATCATTGGAGCCAGGTGGTCAGTTTGAACTCAGTGGAGCCCCTCTTGAAACCTTGCATCAGACTTGTGCTGAAGTTAATTCGCACCTCTATCAGGTCAAAGCTGTTGCTGAGGAAATGGGAATCGGATTTTTGGGGATTGGTTTCCAGCCAAAGTGGGGAATCAAAGACATACCTATAATGCCAAAGGGAAGATACGAGATTATGAGGAATTACATGCCCAAAGTTGGTTCTCTTGGGCTTGACATGATGTTCAGGACATGCACTGTACAGGTCAATCTGGACTTTAGTTCTGAAGCTGATATGATCAGGAAATTTCGTGCTGGCCTAGCTTTGCAGCCTATAGCAACAGCCCTGTTTGCAAATTCACCCTTCACAGAGGGAAAGCCTAATGGTTTTGTCAGTATGAGAAGCCATATTTGGACTGATACTGATAAGGACCGAACAGGCATGCTGCCCTTTGTTTTTGATGACTCATTCGGGTTTGAGCAGTACGTGGATTATGCTCTTGATGTTCCAATGTATTTTGTTTATCGGAAACATAAATATATTGACTGTACTGGATCGACCTTCAGGGACTTCTTGGCAGGAAAGCTTCCCTGTATTCCTGGTGAATTACCGACTCTCAATGATTGGGAGAATCACTTGACCACTATATTTCCTGAGGTCAGGCTGAAGAGGTACTTGGAAATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTAGGGTTATTGTATGATGAAGTTTCTTTGCAAAGCATTTTGGATTTGACAGCAGATTGGACCCTAGAAGAAAGACAAATGCTAAGGAATAAGGTTACTGTAACTGGTCTAAGGACACCATTTCGTGACGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTAAAGTTGGCAAAGGATGGCTTGGAAAGAAGAGGCTTTAAGGAATCAGGATTTTTAAATGAGGTAGCTGAGGTAGTCAGAACAGGTGTCACTCCAGCTGAGAGGCTTTTGGAATTGTATCATGGAAAGTGGGAGCAATCTGTAGATCATGTATTTGAGGAATTGCTTTATTAA 1536 0.429 MAVISRIASSPYSLRHDFIRNKFDGSTVRRNTSFAGNYISSWNSQKRIVAGVGCKRCRRVIVAAGPPTEDAVVATQPLTKQDLVDYLASGCKPKDKWRIGTEHEKFGFEFGSLRPMKYEQIAELLNGIAERFDWDKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGIKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKHKYIDCTGSTFRDFLAGKLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQSILDLTADWTLEERQMLRNKVTVTGLRTPFRDGLLKHVAEDVLKLAKDGLERRGFKESGFLNEVAEVVRTGVTPAERLLELYHGKWEQSVDHVFEELLY* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00565 511 Pfam Glutamate-cysteine ligase family 2(GCS2) 129 418 IPR006336 GO:0004357|GO:0042398
Rops2g00565 511 NCBIfam glutamate--cysteine ligase 77 511 IPR011556 GO:0004357|GO:0006750
Rops2g00565 511 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 45 511 IPR035434 GO:0004357|GO:0006750
Rops2g00565 511 FunFam Glutamate--cysteine ligase 63 511 - -
Rops2g00565 511 PIRSF GCL 67 511 IPR035434 GO:0004357|GO:0006750
Rops2g00565 511 Gene3D - 63 511 - -
Rops2g00565 511 SUPERFAMILY Glutamine synthetase/guanido kinase 89 509 IPR014746 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00565 Rops-Chr2 8230359 8238180 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00565 K01919 - gmx:547545 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00565 2 8230359 8238180 Rops2g00565 2 8230359 8238180 ECH
Rops1g02192 1 43495835 43500146 Rops2g00565 2 8230359 8238180 PCT