Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00521 ATGAAAGTGACAGAGAAAGAGTCAGAGAAGCTAATTTGGGAACAAATGAGAACCCCTACATCTGGGGGCACTCCCATTGTTGTAGCTCAGTCACGAACCTCACACAAGCTTCTCTTCTTGCTCATCCTCTTCGTTTCAGTTACCTATGTTGTTTACACACTCAAGCTCATGTCAACATCACGCTCTTGCAACGATGCACCATTCTCCACCATCCACCACACTCTCTCTTCTTCTCTTCACTCCAAAACAATCCCAATCATCAATGCTACTGTTTCCTCTCTCAAGTTCCCCAACACTGTCCGGCGGGCTTCCCGAGAAACCCACGACGACGGCCAAACGGAGCTCAGGCATGTTGTGTTCGGAATCGCCGCGTCGGCGAAGCTCTGGGAGCAGAGAAAGAACTACATCAAGCTTTGGTACAAAGCAAAAGAGATGCGCGGCGTGGTGTGGCTCGATAATAAGGTGAAGACGGAGGAGAACGATGGGCTCCCGCCGGTGAGAATCTCCGGCGACACTTCCAAGTTTGCTTACACGAACAAGCAGGGTCACCGGTCGGCGATTCGGATCTCACGGATCGTGTCGGAGACACTCCGGTTAGGGATGAAAAACGTGCGGTGGTTTGTGATGGGTGATGACGACACCGTTTTCGTCACTGAAAACCTTGTTCGGATTCTAAGAAAATACGATCATAACCAATTCTATTACATTGGGAGTTTATCAGAGTCTCATTTACAGAACATTTTCTTTTCTTATGGCATGGCTTATGGTGGAGGAGGCTTCGCTATTAGTTACCCTTTAGCGAAAGCTCTTTATAAAATGCAAGATCGTTGCATTCAGAGGTACCCGGGACTTTACGGTTCCGATGATAGAATGCAAGCTTGTATGGCTGAACTCGGCGTTCCACTCACTAAAGAAATCGGTTTTCACCAGTATGATGTGTATGGAAACCTGTTCGGTCTTCTTGCATCTCATCCTGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATCTTCCCCAATGTGACTCGGGTGGAAGCCCTCCAACGTCTCACTATACCAATGAAGTTTGACTCAGCTGGGCTCATGCAGCAATCCATCTGCTACGATAAATCAAAGAAATGGACTGTTTCTGTTTCATGGGGTTTTGCTGTTCAGATCTTTCGTGGTGTGTTTTCACCCCGGGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCAGATTACACTGCATATGCATTCAACACACGTCCAGTTAGCCGAAATCCATGCCAGAAGCCTTTTGTATTTTACTTCTCAAATGCAACATACAATTCTACAACGCAACAGATTTGGACTCGATATGGTAGGCATCGTGTCCCTCACCCGGAATGCCGGTGGAAGATGGCTGATCCTTCTTCTCTTGACAAAGTGGAGGTTTATAAGAAGCCAGATCCGCATCTATGGGATAGAGCTCCAAGGAGAAACTGTTGCAGAGTGCTGAAGTCAAAGGAGAAAGGAACCATGATGATAGATGTGGGTATGTGTAGGGATGGTGAGGTAAGCGAAACATAG 1575 0.4705 MKVTEKESEKLIWEQMRTPTSGGTPIVVAQSRTSHKLLFLLILFVSVTYVVYTLKLMSTSRSCNDAPFSTIHHTLSSSLHSKTIPIINATVSSLKFPNTVRRASRETHDDGQTELRHVVFGIAASAKLWEQRKNYIKLWYKAKEMRGVVWLDNKVKTEENDGLPPVRISGDTSKFAYTNKQGHRSAIRISRIVSETLRLGMKNVRWFVMGDDDTVFVTENLVRILRKYDHNQFYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALYKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLASHPVTPLVSLHHLDVVEPIFPNVTRVEALQRLTIPMKFDSAGLMQQSICYDKSKKWTVSVSWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSNATYNSTTQQIWTRYGRHRVPHPECRWKMADPSSLDKVEVYKKPDPHLWDRAPRRNCCRVLKSKEKGTMMIDVGMCRDGEVSET* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00521 524 Gene3D - 106 371 - -
Rops2g00521 524 FunFam Fringe-related protein-like 105 359 - -
Rops2g00521 524 Pfam Protein of unknown function, DUF604 245 498 IPR006740 -
Rops2g00521 524 PANTHER FRINGE-RELATED 35 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00521 Rops-Chr2 7577252 7581193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00521 1 519 Glycosyltransferase AT5G41460 67.871 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00521 - - gmx:100818244 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00521 2 7577252 7581193 Rops2g00521 2 7577252 7581193 ECH
Rops1g02202 1 43661925 43665087 Rops2g00521 2 7577252 7581193 PCT