Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02202 ATGAAAGAGTCAGAGAAATTAATTTGGGATCAGACTCGAAGCCCCATCTCTGGCATTCCCACACAACCACGACCCTCACCTTCAACCAAAATCATGGTATGGCTTATCCTCGTTACTTCTCTCACCTACTTCGTTTACACTCTCAAGCTAATCTCCACTTCAAGCACCTGCAACCATGGCCCATTCTCCATCAACCACCTCTCTTCCTCTTCTTCACCCATCAATGCCACTGCCATTGCTTTCCCTAACAGAACACAACGCCACCACCAAAAAACAGAGCTTGGGCACGTAGTGTTTGGAATCGCAGCATCAGCGAAGCTCTGGGAACACAGAAAGAACTACATAAAGCTATGGTACAGGAACAAGGAGATGAGAGGTGTGGTGTGGTTGGATGATCACGTGAAGACAGACCCGAAAGAAGGGCTGCCGCCGGTGAAGATCTCCACCGACACCTCCAATTTCCCTTACACCAATAAGCAGGGACACCGTTCCGCTATTCGGATCTCTCGTATCGTTTCCGAAACGCTGCGTTTGGGGCTCAAGAACGTGCGGTGGTTCGTGATGGGAGACGACGACACCGTTTTCGTCACCGACAATTTGCTGAGGATTTTGAACAAGTATGATCACAACCAGTTCTATTACATAGGGAGCTTGTCGGAGAGTCACTTGCAGAACATTTTCTTCTCCTACGGCATGGCCTACGGTGGTGGTGGCTTCGCCATCAGTTACCCTTTGGCAAAAGCTCTGCAAAAAATGCAGGACCGTTGCATTAAGAGGTACCCAGGACTCTATGGCTCTGATGATAGAATGCAAGCTTGTATGGCTGAACTCGGTGTTCCACTCACCAAGGAAATCGGTTTTCATCAGTATGATGTGTATGGGAACCTGTTTGGGCTTCTTGCAGCTCATCCCGTGACTCCATTGGTGTCACTGCACCACCTTGATGTTGTTGAGCCAATCTTCCCCAATGTCACAAGGGTAGAAGCCCTTCAACGGCTTACTATACCAATGAAGCTTGACTCAGCAGCAATCATTCAGCAGTCCATTTGCTATGACAAAAACAAGAGCTGGACCATTTCAGTTTCATGGGGTTTTACTGTTCAAGTATTCCGTGGAATGTTTTCACCCCGGGAGATGGAAATGCCTTCAAGAACATTCCTGAATTGGTATAGAAGAGCAGATTACACTGCATATGCATTCAACACACGCCCCGTTAGCCGAAACCCATGCCAGAAGCCTTTTGTGTTTTACTTGTCAAAGGCAGAATTCAATTCTACGATGCAACAGACAGTGAGTGAATATGAAAGGCATCGTGTCCCTCATCCAGAATGCCGATGGAGGATGGCTGATCCTTCTGCTCTTGACAAAATAGTGGTATATAAGAAGCCAGACCCACATATATGGGATAGAGCTCCAAGGAGAAACTGTTGCAGAGTGATGAAGTCAAACAAGAAAGGTACCATGGTGATAGATGTGGGCGTATGTAGAGCTGGTGAGGTCAGCGAAACTTAA 1512 0.4729 MKESEKLIWDQTRSPISGIPTQPRPSPSTKIMVWLILVTSLTYFVYTLKLISTSSTCNHGPFSINHLSSSSSPINATAIAFPNRTQRHHQKTELGHVVFGIAASAKLWEHRKNYIKLWYRNKEMRGVVWLDDHVKTDPKEGLPPVKISTDTSNFPYTNKQGHRSAIRISRIVSETLRLGLKNVRWFVMGDDDTVFVTDNLLRILNKYDHNQFYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALQKMQDRCIKRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVTRVEALQRLTIPMKLDSAAIIQQSICYDKNKSWTISVSWGFTVQVFRGMFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYLSKAEFNSTMQQTVSEYERHRVPHPECRWRMADPSALDKIVVYKKPDPHIWDRAPRRNCCRVMKSNKKGTMVIDVGVCRAGEVSET* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02202 503 FunFam Fringe-related protein-like 84 338 - -
Rops1g02202 503 Gene3D - 84 342 - -
Rops1g02202 503 PANTHER FRINGE-RELATED 30 499 - -
Rops1g02202 503 Pfam Protein of unknown function, DUF604 224 477 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02202 Rops-Chr1 43661925 43665087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02202 4 502 Glycosyltransferase AT4G23490 68.533 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02202 - - gmx:100818244 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02202 1 43661925 43665087 Rops1g02202 1 43661925 43665087 ECH
Rops1g02202 1 43661925 43665087 Rops2g00521 2 7577252 7581193 PCT