Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00510 ATGGGTATGACCATGGAACAACCTCAATTGTTGTCTAAGATTGCCACTGGCAACGGACATGGTGAAGAATCCCCATATTTTGATGGATGGAAGGCTTATGATGAAAACCCTTTTCATCCCATCACAAATCCTGATGGGGTTATTCAGATGGGTCTTGCAGAGAATCAGCTTTCTTCTGACTTGGTTGAAGATTGGGTAATGAGTAACCCAGAAGCCTCAATTTGCACTCCAGAAGGAGTACATAATTTCAAGGCCATGGCTAACTTTCAGGATTATCATGGTCTATGGGAGTTCAGAAATGCCGTGGCTAAATTCATGGCTAGAACAAGAGGAAACAGAGTCACATTCGACCCTGACCGTATTGTCATGAGCGGTGGCGCAACTGGAGCACATGAAGTCACTGCTTTTTGTTTGGCAGATCCCGGTGAAGCTTTTTTGGTGCCCACTCCTTATTATACAGGATTTGATCGGGATTTGAGATGGAGAACAGGAGTTCAACTTCTTCCTGTTATCTGTGAAAGCTCTAATAATTTCAAGTTGACAAGGCAAGCATTGGAAACTGCCTATGAGAAAGCCAAAGAGGATAACATAAGAGTAAAGGGGTTGCTTATTACTAACCCATCAAACCCATTAGGCACAATAATGGACAGAAAGACATTAAGAACTGTGGTAAGCTTCATCAATGAAAAGCGCATCCACCTAGTATGTGATGAAATATATGCTGCCACGGTTTTCAGCCACCTCGAATTCATAAGCATTGCTGAGATACTAGAGGAAGACACAGACATTGAATGTGACCGTGACCTCATTCACATTGTTTATAGTCTTTCAAAGGATATGGGGTTCCCTGGCTTTAGAGTTGGCATCATATATTCATACAATGATGCTGTAGTCAATTGTGCTCGCAAAATGTCCAGCTTTGGATTAGTTTCCACACAAACTCAGTATCTTTTGGCATCAATGCTATCTGATGATGAGTTTGTGGAAAGGTTCCTTGCAGAAAGTGCAAAGAGGCTAGCACAAAGGTACAGAATTTTCACTGGGGGGCTTGATAGAGTTGGCATTAAGTGCTTGCAAAGCGATGGTGGTCTTTTCGTATGGATGGATTTGCGTCATCTTCTCAAGAAGCCAACCTTTGAATCAGAAATGGAACTTTGGAGGGTGATCATTCATCAAGTTAAGATCAATGTTTCACCTGGTTCTTCTTTTCATTGCTCTGAGCCAGGGTGGTTTAGAGTGTGTTATGCCAACATGGATGACGGGACATTGCAAGTTTCTTTGCAAAGAATTCGCACATTTATTCTTCAAAATAAGGAGGTCAAGGTATCTGAGAAGAAATCTTGTTGGCAGAGTAACTTGAGGCTAAGCCTCAAATCCAGAAGGTTCGATGATATCATGATGTCACCTCACTCCCCCATACCTCAGTCACCTCTAGTTAAAGCCACGATTTGA 1452 0.4222 MGMTMEQPQLLSKIATGNGHGEESPYFDGWKAYDENPFHPITNPDGVIQMGLAENQLSSDLVEDWVMSNPEASICTPEGVHNFKAMANFQDYHGLWEFRNAVAKFMARTRGNRVTFDPDRIVMSGGATGAHEVTAFCLADPGEAFLVPTPYYTGFDRDLRWRTGVQLLPVICESSNNFKLTRQALETAYEKAKEDNIRVKGLLITNPSNPLGTIMDRKTLRTVVSFINEKRIHLVCDEIYAATVFSHLEFISIAEILEEDTDIECDRDLIHIVYSLSKDMGFPGFRVGIIYSYNDAVVNCARKMSSFGLVSTQTQYLLASMLSDDEFVERFLAESAKRLAQRYRIFTGGLDRVGIKCLQSDGGLFVWMDLRHLLKKPTFESEMELWRVIIHQVKINVSPGSSFHCSEPGWFRVCYANMDDGTLQVSLQRIRTFILQNKEVKVSEKKSCWQSNLRLSLKSRRFDDIMMSPHSPIPQSPLVKATI* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00510 483 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 275 288 IPR004838 GO:0003824|GO:0009058|GO:0030170
Rops2g00510 483 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 50 76 - -
Rops2g00510 483 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 142 163 - -
Rops2g00510 483 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 196 220 - -
Rops2g00510 483 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 269 293 - -
Rops2g00510 483 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 301 324 - -
Rops2g00510 483 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 83 99 - -
Rops2g00510 483 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 120 140 - -
Rops2g00510 483 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 232 255 - -
Rops2g00510 483 SUPERFAMILY PLP-dependent transferases 20 434 IPR015424 -
Rops2g00510 483 Gene3D Aspartate Aminotransferase, domain 1 36 429 IPR015422 GO:0003824
Rops2g00510 483 Pfam Aminotransferase class I and II 48 430 IPR004839 GO:0009058|GO:0030170
Rops2g00510 483 Gene3D - 70 324 IPR015421 GO:0003824
Rops2g00510 483 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 11 432 - -
Rops2g00510 483 CDD AAT_like 88 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00510 Rops-Chr2 7424398 7427319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00510 K20772 - gmx:100037458 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02207 1 43775572 43777901 Rops2g00510 2 7424398 7427319 PCT