Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00451 ATGCCAACCCAAGCCGTTCTTGTCACCGGCGGAGCCGGTTACATCGGTAGCCACACCGTCCTTCAGCTTCTCCTCGGCGGTTACAAGGTTGTCGTCGTCGACAACCTCGACAATTCTTCCGAAATCTCTATCCACAGAGTCAAGGAACTCGCCGGAGAATTCGCCGGTAACCTTTCCTTTCACAAGTTAGACCTCCGGGACAGACATGCACTCGAGAAAATATTTTCTGCCACAAAGTTTGATGCTGTCATACATTTTGCTGGACTTAAAGCAGTAGGTGAAAGTGTGCAGAAACCTCTACTCTACTATGACAACAACTTGATTGGGACAATTGTTCTATTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTTTCATCTTCAGCCACTGTATATGGTTGGCCAAAGGAGGTCCCATGTACTGAAGAGTTCCCTTTGTCAGCAGCAAACCCATATGGACGAACCAAGCTTATCATCGAAGAAATTTGTCGTGATATCTTCCAGGCAGAACCAGAATGGAAAATAATACTGTTGAGATACTTCAACCCAGTTGGTGCACATCCTAGTGGTCATATTGGTGAGGATCCTCGTGGAATTCCAAACAACCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGAAGACGCCCTGCATTGACAGTTTTTGGATCAGATTATAATACAAGTGATGGCACTGGAGTTCGCGATTACATTCATGTTGTTGATTTGGCAGATGGGCACATTGCTGCATTGCGTAAGCTAGATGATGCTAAAATAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAAAGCTTTTGAACTAGCCTCTGGAAAGAAAATTCCACTTACAATGGCTGGTCGAAGACCTGGAGATGCTGAAATTGTTTATGCATCAACAAATAAAGCAGAAAGAGAACTTAACTGGAAGGCTAAATATGGCATCGATGAAATGTGTCGTGATCAATGGAATTGGGCCAGCAAAAACCCATATGGCTATGGATCTAAAGATTCCTCCAATTGA 1050 0.441 MPTQAVLVTGGAGYIGSHTVLQLLLGGYKVVVVDNLDNSSEISIHRVKELAGEFAGNLSFHKLDLRDRHALEKIFSATKFDAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLIIEEICRDIFQAEPEWKIILLRYFNPVGAHPSGHIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGSDYNTSDGTGVRDYIHVVDLADGHIAALRKLDDAKIGCEVYNLGTGKGTSVLEMVKAFELASGKKIPLTMAGRRPGDAEIVYASTNKAERELNWKAKYGIDEMCRDQWNWASKNPYGYGSKDSSN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00451 349 Gene3D - 194 335 - -
Rops2g00451 349 FunFam UDP-glucose 4-epimerase 6 199 - -
Rops2g00451 349 FunFam UDP-glucose 4-epimerase 4 278 346 - -
Rops2g00451 349 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Rops2g00451 349 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Rops2g00451 349 PANTHER UDP-GLUCOSE 4-EPIMERASE 3 346 - -
Rops2g00451 349 Gene3D - 6 275 - -
Rops2g00451 349 NCBIfam UDP-glucose 4-epimerase GalE 5 340 IPR005886 GO:0003978|GO:0006012
Rops2g00451 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 341 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00451 Rops-Chr2 6445522 6449439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00451 5 319 Miscellaneous Gene Families AT4G00110 28.049 3.31e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00451 K01784 - gmx:100812565 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02261 1 44715752 44720382 Rops2g00451 2 6445522 6449439 PCT