Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00449 ATGGCCTCTGAGAGGGAAAGTTTTGACCTCTCAGGAGCCTCTGAGAGGGAAAGTTTTGACCTCTCAGGACCTTTGCATCTAACTTATGTCTTATGGGATGATGCATATCATCGAATGTCAGTTGCTGCTAGTTTGGTCCAAGGTGTTTACATTCTAGAAAGGGACCGACAAGAAAAACGTGAAGGTCCGAATGCTCTTGCACCACCTTGGTGGACATTCTTCCACTTTCAGCTGCTTCGTCCACTCATAGATGATGTTGATTCTTCCATCTTTGGTGCAATCTATGAGTTCAAGCCTCCATCATTTCAGGGTAATGACACTTTGTATAGAAGTCCACGTTACGTGATTGCCTTTCGAGGGACACTAACCAAATCAGACTCAGTTTCACGTGATATTGCGTTGGATATCCACTTTATCCGACAAGGGCTTCATCAAACTTCTCGCTCAGGCATAGCTATTCAAGCTGTTAGAAATGTGGTAGCAACTGTAGGTGATTTAAATGTTTGGTTGGCCGGACACTCCCTAGGATCAGCAATGGCAATGCTTACTGGGAAAGCCATGGCCAAGAATGGCATGTTTATTGAATCTTTTCTTTTCAACCCACCATTTGTTTCTGCTCCAATTGAGAGAATAAAGGATGAGAGATTGAAACATGGGATTCGATTTGCTGGCAGCGTGATAACAGCTGGACTCACCATTGCTATGAAAGCCAAGCAGCAGAAGGATTTATCTTTGGATCCTTTTTCTGCTTTGTCTGCCTGGGTCCCATGTTTATTTGTGAATCCATCTGACCATATCTGCTCAGAGTATATTGGATACTTTGAACACAGAAAAAACATGGAGGATATTGGAGCAGGAGTCATTGAAAGGTTAGCAACTCAAAACTCACTTGGGGGCCTACTGATGGGTGTGTTTGGGAAGGAATCTGAACCCCTGCACCTCATTCCTTCAGCTTCTCTGACAGTTAATGTTACTCCTGTCCATGATTTCAAAGAAGCTCATGGGATTCACCAGTGGTGGAAACCTGATTTGCACCTGGAACACAAGCTCTACAATTACAAATAG 1065 0.4366 MASERESFDLSGASERESFDLSGPLHLTYVLWDDAYHRMSVAASLVQGVYILERDRQEKREGPNALAPPWWTFFHFQLLRPLIDDVDSSIFGAIYEFKPPSFQGNDTLYRSPRYVIAFRGTLTKSDSVSRDIALDIHFIRQGLHQTSRSGIAIQAVRNVVATVGDLNVWLAGHSLGSAMAMLTGKAMAKNGMFIESFLFNPPFVSAPIERIKDERLKHGIRFAGSVITAGLTIAMKAKQQKDLSLDPFSALSAWVPCLFVNPSDHICSEYIGYFEHRKNMEDIGAGVIERLATQNSLGGLLMGVFGKESEPLHLIPSASLTVNVTPVHDFKEAHGIHQWWKPDLHLEHKLYNYK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00449 354 Gene3D alpha/beta hydrolase 91 210 IPR029058 -
Rops2g00449 354 Pfam Lipase (class 3) 154 193 IPR002921 GO:0006629
Rops2g00449 354 SUPERFAMILY alpha/beta-Hydrolases 29 218 IPR029058 -
Rops2g00449 354 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 15 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00449 Rops-Chr2 6415970 6419126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00449 13 286 Acyl Lipid Metabolism Gene Families AT2G05260 58.803 4.33e-115 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00449 - - gmx:100812620 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02263 1 44743230 44745763 Rops2g00449 2 6415970 6419126 PCT