Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02263 ATGGCCTCTGAGAGGGAATATTTTGACCTCTGTGGACCCTTACATCTAACTTATGTCGACTGGGATAATGCAGATCATCGAAGGTCTGTTGCTGCTAGTTTGGTCCAAGGTGTTTACGTTCTAGAAAAGGACAGGCAAGAACGACGTGAAGGTCCCAATGCTCTTGCACCGCCTTGGTGGGCATTCTTTCACTTTCAGTTGCTCCGTACACTAATTGATGACGTTGATTCTTCCATTTTTGGTGCAATTTATGAGTTCAAACCTCCACCATCTATTTGCAATGACACCTTACATAGAAGTCCCCGTTATGTAATTGCCTTTCGAGGGACTATAACCAAGGCAGACTCAGTTTCACGTGATATTGAGTTGGATATGCACTTTGTCCGAAATGGACTTCATCAAACTTCACGCTCTGAGATAGCTATTCAAGCTGTCCGAAACATGGTGGCCACTGTCGGTGATTCCAATATCTGGTTGGCTGGCCACTCTCTAGGATCAGCAATGGCATTGCTTACTGGGAAAACCATGGCCAAGACTGGCATATTTATTGAGTCTTTTCTTTTCAACCCTCCATATGTATCTGCTCCAATTGAGAGAATTAAGGATAAGAAATTGAAACATGGGCTTAGAATTGCTGGCAGTGTGGTTACAGCTGGACTCGCCATTGCTATGAAGGCTAAGCAGAAGAAGAGTTTGTCCTTCGATTCATTTGCTGCTTTGTCTGCCTGGGTTCCATGCTTATTTGTGAATCCATCAGACTATATCTGCTCGGAGTATATTGGATACTTTGAACACAGAAGAAAAATGGAGGAGATTGGTGCTGGAAGTATTGAAAAGTTGGCAACTCAAAACTCTCTTGGTTGTCTACTGATGAGTGCGTTTGGCAAGGAATCTGAACCCCTGCACCTCATTCCTTCAGCTTCTCTCACAGTTAATTTTACTCCTTCACGGGATTTCAGAGAAGCTCATGGAATTCATCAGTGGTGGAAACCCGACTCACGCCTTGAATCCAAGCTCTACAAATACTAA 1029 0.4373 MASEREYFDLCGPLHLTYVDWDNADHRRSVAASLVQGVYVLEKDRQERREGPNALAPPWWAFFHFQLLRTLIDDVDSSIFGAIYEFKPPPSICNDTLHRSPRYVIAFRGTITKADSVSRDIELDMHFVRNGLHQTSRSEIAIQAVRNMVATVGDSNIWLAGHSLGSAMALLTGKTMAKTGIFIESFLFNPPYVSAPIERIKDKKLKHGLRIAGSVVTAGLAIAMKAKQKKSLSFDSFAALSAWVPCLFVNPSDYICSEYIGYFEHRRKMEEIGAGSIEKLATQNSLGCLLMSAFGKESEPLHLIPSASLTVNFTPSRDFREAHGIHQWWKPDSRLESKLYKY* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02263 342 Gene3D alpha/beta hydrolase 67 207 IPR029058 -
Rops1g02263 342 SUPERFAMILY alpha/beta-Hydrolases 48 196 IPR029058 -
Rops1g02263 342 Pfam Lipase (class 3) 136 180 IPR002921 GO:0006629
Rops1g02263 342 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02263 Rops-Chr1 44743230 44745763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g02263 1 276 Acyl Lipid Metabolism Gene Families AT2G05260 59.233 1.59e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02263 - - gmx:100786952 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02263 1 44743230 44745763 Rops1g02263 1 44743230 44745763 ECH
Rops1g02263 1 44743230 44745763 Rops2g00449 2 6415970 6419126 PCT