Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00448 ATGGCGGATGGACCCATAACGCGGCCACCACCAAAGCGGCCACGGCCACCGTCAGGACGCACCAACCTCGCATCATGTGTGGTTGCCACAATCTTCTTAATCTTCATCATCATCGTTATCCTCATAGTCTATTACACAGTGTTCAAACCACAAGACCCGAAAATCGCCGTTAGCGCCGTTCAGCTACCGTCATTCTCTGTCGTAAACGGCACCGTCAACTTCACCTTCTCCCAATACGCCTCCGTCAAGAACCCTAACCGCGCCGTTTTCTCTCACTACGACAGTTCTCTTCAGCTTATTTACTCCGGCAGCCAGGTTGGGTTCATGTTCATCCCCGCCGGCGAGATCGACGCCAGAAGGACCCAATACATGGCGGCGACGTTCTCCGTTCAGTCGTTTCCGTTGTCGGCGCCGAGGAGTTTGGGTCCCACTCTGGCGAATGGTGATGGGGTTGGGTTTAACAATGGGTTGAGGGTGGAACCCACCCTGGAGATTGAATCCAAGTTGGAGATGGCAGGGCGCGTGAAGGTTTTGCACTTTTTCACTCATCACGTTCAGGCCAAAGCTGGTTGCAGGGTTGCTATTGCCGTTAATGATGGATCTGTTTTAGGTTTTCACTGTTAA 624 0.5272 MADGPITRPPPKRPRPPSGRTNLASCVVATIFLIFIIIVILIVYYTVFKPQDPKIAVSAVQLPSFSVVNGTVNFTFSQYASVKNPNRAVFSHYDSSLQLIYSGSQVGFMFIPAGEIDARRTQYMAATFSVQSFPLSAPRSLGPTLANGDGVGFNNGLRVEPTLEIESKLEMAGRVKVLHFFTHHVQAKAGCRVAIAVNDGSVLGFHC* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00448 207 Pfam Late embryogenesis abundant protein 81 189 IPR004864 -
Rops2g00448 207 SUPERFAMILY LEA14-like 33 133 - -
Rops2g00448 207 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 14 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00448 Rops-Chr2 6412178 6412801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00448 - - gmx:100782341 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02264 1 44754993 44755547 Rops2g00448 2 6412178 6412801 PCT