Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02264 ATGGGGAAGCCTTCAAGCCGAACCAACCTAGCCTCGTGTTTGGTAGCCACCATCTTCTTGATTTTCCTCATCATCGTCATCTTCATCCTTTACTTCACACTGTTCAAGCCCCAGGACCCCGAGATCGCCGTCAGTGCCGTCCAAGTCCCCTCCTTTTCAGTCACTAACGGCACCGTCAATTTCACTTTCTCCCATTACGCCTCCGTTAGGAACCCTAACCGAGGCACTTTCTCACACTACGATAGCTCACTCCAGCTTCTCTACTATGGAAGACAGGTCGGGTTCATGTTCGTCCCCGCCGGCAAGATCCATGCCCGAAGAACCGAGTACATGGCTGCCACATTCACCGTCCAGTCTCTCCCGTTGGGCTTTGGGCCCAACTCTACTTATGGGCTTGGTAATAGGGTGGGGCCCACGATGGTGGTAGAGTCGAGGATAGAGATGGTGGGGAGGGTGAGGGTGTTGCACCTTTTCAGTCATCACGTGGAGGCTAAAGCTGGATGCACGGTCGCTATCGCTGTCCCTGATGGATCCGTATTAGGTTTTCATTGCTAA 555 0.5333 MGKPSSRTNLASCLVATIFLIFLIIVIFILYFTLFKPQDPEIAVSAVQVPSFSVTNGTVNFTFSHYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGKIHARRTEYMAATFTVQSLPLGFGPNSTYGLGNRVGPTMVVESRIEMVGRVRVLHLFSHHVEAKAGCTVAIAVPDGSVLGFHC* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02264 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 175 - -
Rops1g02264 184 Pfam Late embryogenesis abundant protein 68 165 IPR004864 -
Rops1g02264 184 SUPERFAMILY LEA14-like 19 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02264 Rops-Chr1 44754993 44755547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02264 - - gmx:100820289 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02264 1 44754993 44755547 Rops1g02264 1 44754993 44755547 ECH
Rops1g02264 1 44754993 44755547 Rops2g00448 2 6412178 6412801 PCT