Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00208 ATGGGTTTGAGCAGCACCAGTAGTTTGTTACTCACTTCACCATTCTCCACTTCCACTTCCACTCTCTTCTTCTCCTCTCATTCCAAACTCAAATTCCCACTTCCTCTTCGCTTTCTCTCTCTAAACTGTTTCTCTTCCCTCCGAACAACCACACACAACTCTGCCCCTAACCCCACCCACGACGACTTGTTTGACCCTCTTCCCCTTCCCCTTTCTCACAATGATAATCAACAACCCTCCAACGCCATCGAGCGCGTCGTTCTTCGCTTGCGTAATTTAGGCTCTGCTTCAGACCCAACCCAACATTACTTTTTGCGGCGAGAATGGATTCGACCCGATACCACGTTGTCGGAGGAGACGGTTTTTCCATGGGAGAAGGAGCATCATGCGGAGGAGAAGCAGAAAGAGGAGGAATATGAAAAGGGGTTGAGGAAGAAGAAGGAGAAGGTAAAGTCACCATCTTTGGCAGAGTTGACACTTGGGGAAGAGGAACTGAAGCGATTGCGAACAGTGGGAATGCATGTTAAGGATAGGGTTAGTGTCCCCAAAGCTGGGCTCACGCAAGCCGTGCTCGACAAGATTCATTATCAATGGAAGAAAAATGAGGTGGTGAGGCTCAAGTTTCATGAACTCCTTGCTCAGAATATGAAGTTGGCTCATCAAATTGTCGAGCGTCGAACTAGAGGATTGGTTATATATAAGTCAGGAAGTGTTATGTGGGTGTACCGTGGTAAGAATTATGAAGGGCCAACATCCAGCAGCCAAGTGAATGGAAATGAAGGTGATGATCACGGTAATGTGACCTCCTTGTCGATGGAAAAGAGTGAGGCAGTTGTGTGGAATCAAGAACAGCATGAGAACATGACACCGGAGGAAGCAGAGTTTGACAGGATGCTTGACGATTTAGGTCCTCGTTTTGTCGAATGGTGGGGTACAGGAATACTTCCTGTTGATGCTGATTTACTTCCTCCCATTGTTCCCGGTTACAAAACACCTCTTAGGCTTCTTCCTGCCAAAATGCGTCCAGGACTAACCAATGATGAGCTGACAAATATGCGGAAACTTTCCAAATCCCTTCCTTCTCATTTTGCCTTAGGAAGAAATAGAAATCTTCAAGGTCTGGCTTGTGCTATTCTTAAGCTTTGGGAGAAAAGCTTAGTTGCAAAGATTGCTGTCAAGCGTGGTATCGTGAATACAAACAATGAACTGATGGCTGAGGAGCTGAAGAAATTAACAGGAGGTGCCTTGTTGCTAAGGAATAAATATTACATTGTAATATATCGTGGGAAGGACTTTGTTCCAACCAGTGTGGCCACTGTTTTAGCTGAAAGGAAGGAATTGAGGAAACAGGTGCAGGATGTTGAGGAGAAGGTACGGAGCAGAGCTGTTGATGTAACTCCATCAGGGGAAGACGAAGCAACTGCACAAGCAGGATCGTTGGCTGAGTTTTATGAGGCTCAAGCATGCTGGGGAAGGGATATATCTACTGAAGAACGTGAGAAGATGATGAAAGAGGCTGCTGAAGCCAAGAATGTTAGGCTTGTCAGAAAAATTGAACGTAAACTAGCTGTTGCCCAGGCCAAAAGGCAAAGGGCAGAAAAGCTATTAGCTAAGATAGAAGCATCCATGATTCCAGCTAGTCCTGATAATGACTGGGAAACAATCACAGATGAAGAACGTATTATGTTCCGTTCAATTGGCTTAAGGATGAAGACGTACTTGCAACTTGGTACACGTGGTGTTTTTGATGGTGTCATTGAGAATATGCATTTGCATTGGAAACATCGAGAACTTGTTAAATTAATAACAAAACAAAAGACACTTGCTTTTGTTGAAGACACAGCTAGGTTACTGGAATATGAGAGTGGTGGAATACTAGTCGCAATAGATAGACTTCCCAAGGGGTTTTCTCTTATTTACTATCGTGGAAAGAATTATAGGCATCCCCTTACTCTGCGGCCTAGAAACCTTTTAACGAAGGCAAAAGCATTGCAGCGTGCAATAGCTATGCAACGGCATGAGGCTCTGAGTCAGCATATAACTGAATTGGGGAAAAAAATAGAAGAAATGAAAAAAGAACTCGGTTTGTCTCAAGATTTGGAGCCTGAAGATAGGTGGTGCGCAGAGGACCGAAACCGAATAGACCATATATCAGAATTCACCCAAAGTGAGGATGAAGGCTCTGACGATGATAATGACGGTGATTTTGATAACACTGTAACCAGTGATTGGGATGATGAGGATTCCGAATTTTCAGACTTGGAAAATGATGGGTTTCCTGTGAAGGCAGGTTGA 2295 0.4436 MGLSSTSSLLLTSPFSTSTSTLFFSSHSKLKFPLPLRFLSLNCFSSLRTTTHNSAPNPTHDDLFDPLPLPLSHNDNQQPSNAIERVVLRLRNLGSASDPTQHYFLRREWIRPDTTLSEETVFPWEKEHHAEEKQKEEEYEKGLRKKKEKVKSPSLAELTLGEEELKRLRTVGMHVKDRVSVPKAGLTQAVLDKIHYQWKKNEVVRLKFHELLAQNMKLAHQIVERRTRGLVIYKSGSVMWVYRGKNYEGPTSSSQVNGNEGDDHGNVTSLSMEKSEAVVWNQEQHENMTPEEAEFDRMLDDLGPRFVEWWGTGILPVDADLLPPIVPGYKTPLRLLPAKMRPGLTNDELTNMRKLSKSLPSHFALGRNRNLQGLACAILKLWEKSLVAKIAVKRGIVNTNNELMAEELKKLTGGALLLRNKYYIVIYRGKDFVPTSVATVLAERKELRKQVQDVEEKVRSRAVDVTPSGEDEATAQAGSLAEFYEAQACWGRDISTEEREKMMKEAAEAKNVRLVRKIERKLAVAQAKRQRAEKLLAKIEASMIPASPDNDWETITDEERIMFRSIGLRMKTYLQLGTRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDRLPKGFSLIYYRGKNYRHPLTLRPRNLLTKAKALQRAIAMQRHEALSQHITELGKKIEEMKKELGLSQDLEPEDRWCAEDRNRIDHISEFTQSEDEGSDDDNDGDFDNTVTSDWDDEDSEFSDLENDGFPVKAG* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00208 764 Coils Coil 129 149 - -
Rops2g00208 764 SUPERFAMILY YhbY-like 159 251 IPR035920 -
Rops2g00208 764 SUPERFAMILY YhbY-like 554 651 IPR035920 -
Rops2g00208 764 Pfam CRS1 / YhbY (CRM) domain 344 428 IPR001890 GO:0003723
Rops2g00208 764 Pfam CRS1 / YhbY (CRM) domain 556 642 IPR001890 GO:0003723
Rops2g00208 764 Pfam CRS1 / YhbY (CRM) domain 161 243 IPR001890 GO:0003723
Rops2g00208 764 ProSiteProfiles CRM domain profile. 158 254 IPR001890 GO:0003723
Rops2g00208 764 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 98 731 IPR045278 GO:0000375|GO:0003729
Rops2g00208 764 Coils Coil 673 693 - -
Rops2g00208 764 MobiDBLite consensus disorder prediction 724 754 - -
Rops2g00208 764 FunFam CRS2-associated factor 1, chloroplastic 159 254 - -
Rops2g00208 764 SUPERFAMILY YhbY-like 344 435 IPR035920 -
Rops2g00208 764 SMART CRS1_YhbY_2 344 428 IPR001890 GO:0003723
Rops2g00208 764 SMART CRS1_YhbY_2 555 642 IPR001890 GO:0003723
Rops2g00208 764 SMART CRS1_YhbY_2 160 243 IPR001890 GO:0003723
Rops2g00208 764 Coils Coil 437 457 - -
Rops2g00208 764 Gene3D - 158 255 IPR035920 -
Rops2g00208 764 Gene3D - 554 653 IPR035920 -
Rops2g00208 764 Gene3D - 343 436 IPR035920 -
Rops2g00208 764 ProSiteProfiles CRM domain profile. 553 653 IPR001890 GO:0003723
Rops2g00208 764 MobiDBLite consensus disorder prediction 717 764 - -
Rops2g00208 764 FunFam CRS2-associated factor 1, chloroplastic 343 439 - -
Rops2g00208 764 FunFam CRM-domain containing factor CFM3B, chloroplastic 554 656 - -
Rops2g00208 764 MobiDBLite consensus disorder prediction 127 146 - -
Rops2g00208 764 ProSiteProfiles CRM domain profile. 342 439 IPR001890 GO:0003723
Rops2g00208 764 Coils Coil 515 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00208 Rops-Chr2 3130800 3139163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00208 - - gmx:100776626 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00208 2 3130800 3139163 Rops2g00208 2 3130800 3139163 ECH
Rops2g00208 2 3130800 3139163 Rops5g00238 5 3648176 3655399 PCT