Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00207 ATGAGTAGTGGTAATAGTAAGAAAAGGTTCATTCCCATTAAGTTGGAAGAAGCTGCAGTGGACTTGTTAAACCATCTGGTGAAGGTGAAGGAGAAGCAAAAGATTCCATTCTTAGTTTCTCTGGTTTTGATAGCTTGGGCTATTCACAGATGGCTCTTCCCTGTCTCCAATTGGCTTCCACTTGCACTTGCTATATGGGCATCCTCACAATATGGGAATTACCAGTGCAAATTACTGGAGGAGGACTTGAATAAGAAATGGAATCGGATCCTGCTCAACACCTCGCCAGTCACGCCATTGGAACAATGTGAGTGGTTGAATCTGCTATTGACACAAATCTGGTCCAACTATTTTAATCCAAAGCTCTCAAACAGGTTATCAGCCATAGTTGAGAAACGTTTGAAGCTCCGGAAACCAAGATTTATAGAAAGAGTTGAGGTGCAGGAGTTTTCACTTGGATCATGCCCTCCAAGTTTGGGTCTTCAAGGGATACGATGGTCAACCTCTGGTGATCAGCGAGTCCTGAAAATGGGTGTTGATTGGGACACGAGTGAAATGAGCATTTTGATGGCTGCTAAGCTTGCAGTTGGAACTGCCCGAATTATCATTAACAGTCTTCATATCAAGGGTGATCTTCTCGTGACACCAATTCTAGATGGAAAAGCACTACTGTATTCATTTTTATCTCCACCTGAGGTGAGAATAGGAGTTGCCTTTGGAAGCGGCGGAAGCCAATCAGCCACTGAGTTGCCTGGCGTTTCTCCTTGGCTGGTTAAACTTTTTACTGACACCTTGGGTAAAACCATGGTGGAACCTAGGCGCCGTTGTTTCACTTTGCCTGCAGTTGATTTAAGGAAAAATGCAGTTGGAGGCATTATATATGTTTCAGTGATTTCAGCAAACAAGCTCTCTAGGAGTTACTTCAAGGGGAGCCCATCTTGGAGGCAACAAAATAGTACAATCAATGGCTATTTAGAAGACAACTTGGATGACAAGGACTTACAGACATTGGTAGAGGTAGAAGTGGAGGAATTGACAAGGAGGACAGGTGTGAGCCTTGGTTCAACTCCAAGATGGGATGCAACATTTAATATGGTTTTACATGATAATACAGGAATTCTTCGCTTCAATCTTTATGAGTGTCCTCCTGACTGTGTGAAGTATGACTACCTAGCAAGTTGTGAAATCAAGATGAGGCATGTTGGAGATGATTCAACCATAATGTGGGCGATAGGGCCTGATTCTGGTGTCATAGCAAAGCATGCAAAGTTTTGTGGAGATGAAGTAGAAATGGTTGTCCCATTTGAGGGGGCCAACTCAGCAGAGTTAAAGGTGAGAATTGTAGTAAAAGAGTGGCAATTTTCTGATGGTTCGCATAGCTTGAACAACCTCCGTTCCAGTTCTCAACTGTCACTTAGTGGATCTTCAAATCTTCTGTCAAGAACTGGAAGGAAACTTAAGATAACTGTTGTGGAAGCAAAGGACCTCCCTGCAAAAGACAGATTTGGAAAATTTGACCCATACGTTAAATTGCAGTATGGAAAGGTTGTCAAGAGAACAAAGATTGCTCCTCCTCCTACCACTCCAAATCCTGTGTGGAATCATTCATTTGAATTTGATGAGAATATTGGAGATGAATACCTAATTGTAAAATGCTTTAGTGAAGAAACTTTTGGAGATGAAAACATTGGTAGTGCACATGTAAATTTGGAAGGACTGGTGGACGGGTCAATTAAGGATGTATGGATCCCTCTTGAAGGAGTGAGTTCTGGTGAATTAAGACTTAAAACAGAAGTAGTTAGGGTGGATGACCAAGAAGGAACAAGGGGTTCAGCTTCGGGCTTGCGCAATGGTTGGATAGAACTTGTTCTGATTGAAGCAAGGGATCTTATTGCTGCCGATCTTCGAGGGACAAGTGATCCTTATGTTAGGGTAAACTATGGAAACATAAAGAAAAGGACAAAGGTTGTACACAAAACTGTCAACCCTCGTTGGAACCAGACTTTAGAGTTCCTTGATGATGGTAGTCCCCTGATACTGCATGTTAAGGACCATAATGCTTTACTACCCACATCAAGTATAGGTGAATGTGTTGTAGAATATCAAATGTTGCCTCCAAACCAGATGTCTGACAAGTGGATACCTCTCCAAGGGGTGAAAAGTGGTGAGATCCACATCCAAATTACAAGAAAAGTTCCAGAGATGCAAAAGAAACAGATCGCAGATTCTGAACCTTCGTTGAGTAAATTACACCAAATTCCTAGCCAGATAAAGGAGATGATGAAAAAGATTCGATCTTTAATAGACGATGGAAATCTTGAAGGACTGTCTACAACTTTGAGTGAGTTAGAAACTCTAGAGGATACACAGGAAGGGTATATAGCACAGTTGGAGATTGAGCAAATGCTTCTTCTCAGCAAAATAAATGAACTGGGCAAGGAGATCATCGATTCTTCTCCTTCTCTCATCAGTAGTCTTTCTCGAACTGGAAATTGA 2496 0.4187 MSSGNSKKRFIPIKLEEAAVDLLNHLVKVKEKQKIPFLVSLVLIAWAIHRWLFPVSNWLPLALAIWASSQYGNYQCKLLEEDLNKKWNRILLNTSPVTPLEQCEWLNLLLTQIWSNYFNPKLSNRLSAIVEKRLKLRKPRFIERVEVQEFSLGSCPPSLGLQGIRWSTSGDQRVLKMGVDWDTSEMSILMAAKLAVGTARIIINSLHIKGDLLVTPILDGKALLYSFLSPPEVRIGVAFGSGGSQSATELPGVSPWLVKLFTDTLGKTMVEPRRRCFTLPAVDLRKNAVGGIIYVSVISANKLSRSYFKGSPSWRQQNSTINGYLEDNLDDKDLQTLVEVEVEELTRRTGVSLGSTPRWDATFNMVLHDNTGILRFNLYECPPDCVKYDYLASCEIKMRHVGDDSTIMWAIGPDSGVIAKHAKFCGDEVEMVVPFEGANSAELKVRIVVKEWQFSDGSHSLNNLRSSSQLSLSGSSNLLSRTGRKLKITVVEAKDLPAKDRFGKFDPYVKLQYGKVVKRTKIAPPPTTPNPVWNHSFEFDENIGDEYLIVKCFSEETFGDENIGSAHVNLEGLVDGSIKDVWIPLEGVSSGELRLKTEVVRVDDQEGTRGSASGLRNGWIELVLIEARDLIAADLRGTSDPYVRVNYGNIKKRTKVVHKTVNPRWNQTLEFLDDGSPLILHVKDHNALLPTSSIGECVVEYQMLPPNQMSDKWIPLQGVKSGEIHIQITRKVPEMQKKQIADSEPSLSKLHQIPSQIKEMMKKIRSLIDDGNLEGLSTTLSELETLEDTQEGYIAQLEIEQMLLLSKINELGKEIIDSSPSLISSLSRTGN* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00207 831 SMART C2_3c 292 410 IPR000008 -
Rops2g00207 831 SMART C2_3c 485 582 IPR000008 -
Rops2g00207 831 SMART C2_3c 619 713 IPR000008 -
Rops2g00207 831 Gene3D C2 domain 471 603 IPR035892 -
Rops2g00207 831 Gene3D C2 domain 608 731 IPR035892 -
Rops2g00207 831 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 99 280 IPR031468 GO:0008289
Rops2g00207 831 CDD SMP_SF 122 277 - -
Rops2g00207 831 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 616 729 IPR035892 -
Rops2g00207 831 ProSiteProfiles C2 domain profile. 589 714 IPR000008 -
Rops2g00207 831 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 332 405 IPR035892 -
Rops2g00207 831 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 485 599 IPR035892 -
Rops2g00207 831 Pfam C2 domain 620 716 IPR000008 -
Rops2g00207 831 Pfam C2 domain 485 585 IPR000008 -
Rops2g00207 831 Pfam C2 domain 292 400 IPR000008 -
Rops2g00207 831 CDD C2 486 585 - -
Rops2g00207 831 CDD C2 620 716 - -
Rops2g00207 831 ProSiteProfiles C2 domain profile. 466 583 IPR000008 -
Rops2g00207 831 PANTHER OS01G0128800 PROTEIN 16 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00207 Rops-Chr2 3123371 3130107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00207 619 724 Lipid Metabolism Gene Families AT1G51570 30.702 3.79e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00207 - - ccaj:109803570 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00239 5 3661658 3668832 Rops2g00207 2 3123371 3130107 ECH
Rops2g00207 2 3123371 3130107 Rops2g00207 2 3123371 3130107 ECH
Rops2g00207 2 3123371 3130107 Rops5g00239 5 3661658 3668832 PCT