Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00053 ATGATCACGTTAACTGATTTCTATCATGTCATGACTGCAATGGTGCCACTTTACGTGGCTATGATATTAGCCTATGGTTCAGTAAAATGGTGGAAAATCTTCTCCCCCGACCAATGCTCTGGCATCAACCGATTTGTGGCTTTGTTTGCAGTGCCTCTCCTTTCTTTCCATTTCATTGCCTCTAACAATCCTTATCAAATGAACTTCCGCTTCATCGCTGCTGACACCCTTCAAAAGATCATCATTTTAGTTCTTCTTACCATTTGGACCAACTTGAGCAAAAGGGGTTGCTTGGAATGGGCAATAACCCTTTTCTCCATTTCCACCCTCCCAAACACGTTGGTTATGGGCATCCCTTTGCTCAAAGGGATGTATGGTGAGTTCTCAGGGAGCCTAATGGTCCAAATTGTGGTCCTCCAATGCATCATTTGGTACACTTTGATGCTGTTCCTGTTTGAGTACAGAGGAGCCAGAATGCTAATCTCTGAGCAATTTCCAGACACAGCTGGTACCATTGTCTCCATTCATGTGGACTCTGATGTGATGTCTCTGGATGGAAGACAACCCTTAGAAACTGAAGCTGAGATCAAAGAAGATGGGAAGCTTCATGTCACTGTGAGAAAATCCAATGCTTCAAGATCCGATATTTTCTCAAGAAGGTCTCAGGGGCTTTCCTCCACTACCCCTCGTCCTTCAAATCTTACCAATGCAGAGATATACTCTTTGCAATCCTCTAGGAACCCAACTCCAAGAGGGTCTAGTTTCAACCACACAGATTTCTATTCCATGATGGCTGGTGGTCGTAATTCCAACTTTGGTGCTTCTGATGTTTATGGACTCTCAGCATCAAGAGGACCAACACCAAGGCCTTCTAATTATGATGAAGATGCTCAAGCGGGTGGTGGTAAGCCAAGGTATCATTACCATGCTGCTTCTGGTGGAACAGGACATTACCCTGCACCAAACCCGGGAATGTTCTCTCCCACTGCGTCTAAAAATGCTGCTGCTAATGCTAATGCCAATGCAAATGCCAAAAGGCCTAATGGTCAAGTACAAGCTCAGCAGAAACCAGAGGATGGGAATAAGGACCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCCCCAGTTTCTGATGTGTTTGGTGGCCATGAATATGGAGTTCATGATCATAAAGAAGTTAAATTGACTGTGTCTCCCGGAAAAGTGGAGGATCATAGAGACGCTCAAGAGGACTATCTAGAGAGGGATGATTTCAGCTTTGGAAACAGAGGAATGGACAGGGAAATGAATCACCATGAAGCTGAGAAAGTTGGAAACGGCAAGCCAAAAACTATGCCTCCAGCAAGTGTAATGACAAGGCTCATCTTGATAATGGTGTGGAGAAAACTTATCAGAAACCCCAACACCTACTCCAGCCTAATCGGCCTAATTTGGTCACTTATTTCATTCAGGTGGAATGTTGAAATGCCTGCCATAATAGCAAAGTCTATTGCCATATTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTGTTCATGGCTTTGCAACCAAGGATCATTGCATGTGGAAATTCCTTAGCAGCTTTTTCTATGGCCGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAGAGGCGTTCTCTTACACGTTGCCATTGTTCAGGCAGCTCTTCCACAAGGAATTGTCCCTTTTGTCTTCGCTAAGGAATATAATGTACATCCTGATATTCTCAGTACAGGTGTTATTTTTGGGATGTTGATTGCATTGCCCATAACGCTCGTTTATTACATCTTGCTGGGGCTATGA 1839 0.4443 MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYQMNFRFIAADTLQKIIILVLLTIWTNLSKRGCLEWAITLFSISTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFLFEYRGARMLISEQFPDTAGTIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDAQAGGGKPRYHYHAASGGTGHYPAPNPGMFSPTASKNAAANANANANAKRPNGQVQAQQKPEDGNKDLHMFVWSSSASPVSDVFGGHEYGVHDHKEVKLTVSPGKVEDHRDAQEDYLERDDFSFGNRGMDREMNHHEAEKVGNGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLISFRWNVEMPAIIAKSIAILSDAGLGMAMFSLGLFMALQPRIIACGNSLAAFSMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00053 612 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 612 - -
Rops2g00053 612 MobiDBLite consensus disorder prediction 279 358 - -
Rops2g00053 612 Pfam Membrane transport protein 9 607 IPR004776 GO:0016020|GO:0055085
Rops2g00053 612 MobiDBLite consensus disorder prediction 213 235 - -
Rops2g00053 612 MobiDBLite consensus disorder prediction 326 357 - -
Rops2g00053 612 NCBIfam auxin efflux carrier 1 612 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00053 Rops-Chr2 954886 958548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00053 1 603 Organic Solute Cotransporters AT1G73590 72.598 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00053 K13947 - gmx:100499637 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00053 2 954886 958548 Rops2g00053 2 954886 958548 ECH
Rops2g00053 2 954886 958548 Rops5g00364 5 6345143 6349143 PCT