Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03911 ATGGAACCTGTCAAAACCATTCTCACCAATAATGCCAAATACTCTTCCATCTTCTTGGCCATTTTTGTTCTCTTGGCTTCAGCATTATCTTCAGCAAATGCCAAAACTCACGAGCCCGAGTTTGTGGTTCAAGCAACTCCAGTGAAGAGGCTGTGCAAAACCCACAACACCATCACCGTGAATGGCCAATATCCAGGCCCAACATTGGAAATAAACAATGGAGACACTTTGGTCGTCAAAGTCATTAACAAAGCTCGTTACAACGTTACCATTCATTGGCACGGTATTCGACAAATGAGAACAGGATGGGCTGATGGACCAGAATTTGTGACTCAGTGTCCCATTCGTCCTGGAGGGAGTTACACCTACCGTTTTACAGTTCAAGGACAAGAAGGCACACTTTGGTGGCACGCTCATAGCTCATGGTTAAGAGCCACTGTTTATGGAGCTTTAATCATTCGTCCTAGGAAAGGAGAGGCCTACCCTTTCCCTGAGCCAAAGCGCGAGACACCCATTCTTTTAGGGGAATGGTGGGACACAAACCCCATCGATGTTGTGAGGCAGGCCACACGAACCGGGGCAGCTCCGAATGTGTCTGATGCATACACTATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCCAGCAAAGGCACTACCATTGTTCCAATAGATTCCGGCGAGACTAACCTCCTCCGTGTCATAAATGCTGCACTAAACCAACCTCTCTTCTTCACCATTGCCAACCATAAGCTAACAGTGGTTGGTGCTGATGCCTCTTATCTTAAACCTTTCACCACCAAAGTCCTCATGCTAGGACCTGGTCAAACCACTGATGTCTTAATCACCGGTGACCAACCACCTTCCCGTTACTACATGGCAGCACGTGCTTACCAATCAGCCCAAAACGCGGCGTTTGACAACACCACCACCACTGCCATTCTTCAATACAAAAAATCAGCACATTCTCATTCCAAAGGAGTGAAAGTTAAACCAGTGATGCCCCCACTCCCTGCTTACAATGACACCAACACAGTCACTGCCTTCAGCAGTAGCCTCAAAAGTCCCATGAAAGTTGAAGTGCCCACTGAAATAGATGAGAGCCTCTTCTTCACTGTGGGATTAGGACTCAACAAATGCCCACCAAATTTTAGAGCAAGGAGATGCCAAGGACCAAATGGGACACGCTTCACTGCAAGCATAAATAACGTGTCCTTTTCTCTTCCAAACAACATTTCAATCCTTCAGGCTCACCATCTTGGAATCCCAGGAGTCTTCACCACTGATTTTCCAGCAAGACCGCCGGTGAAATTCGACTACACCGGAAACGTGAGCCGTTCACTCTGGCAACCTGTCCCAGGGACTAAAGCATACAAGTTGAAGTTTGGTTCAAGGGTGCAGATTGTGTTGCAGGACACTAGCATTGTCACTACTGAGAACCACCCAATTCACCTTCATGGATATGATTTCTATATCGTTGCTGAAGGATTTGGAAATTTCAACCCCAAGAAAGATACTGCAAAATTCAACCTTGTTGATCCACCTCAGAGGAACACAGTGGCAGTACCTGTAGGTGGATGGGCTGTTATCCGATTTGTTGCTGATAACCCAGGTGCCTGGCTTATGCATTGTCACTTGGATGTTCATATCACCTGGGGTTTGGCCACAGTGCTATTGGTAGAGAACGGAGTTGAGAAATTGCAATCCATAGAGCCTCCTCCAGTGGATCTGCCTCTTTGTTAG 1743 0.4687 MEPVKTILTNNAKYSSIFLAIFVLLASALSSANAKTHEPEFVVQATPVKRLCKTHNTITVNGQYPGPTLEINNGDTLVVKVINKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGTLWWHAHSSWLRATVYGALIIRPRKGEAYPFPEPKRETPILLGEWWDTNPIDVVRQATRTGAAPNVSDAYTINGQPGDLYKCSSKGTTIVPIDSGETNLLRVINAALNQPLFFTIANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLITGDQPPSRYYMAARAYQSAQNAAFDNTTTTAILQYKKSAHSHSKGVKVKPVMPPLPAYNDTNTVTAFSSSLKSPMKVEVPTEIDESLFFTVGLGLNKCPPNFRARRCQGPNGTRFTASINNVSFSLPNNISILQAHHLGIPGVFTTDFPARPPVKFDYTGNVSRSLWQPVPGTKAYKLKFGSRVQIVLQDTSIVTTENHPIHLHGYDFYIVAEGFGNFNPKKDTAKFNLVDPPQRNTVAVPVGGWAVIRFVADNPGAWLMHCHLDVHITWGLATVLLVENGVEKLQSIEPPPVDLPLC* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03911 580 Pfam Multicopper oxidase 43 157 IPR011707 GO:0005507
Rops11g03911 580 Gene3D - 165 359 IPR008972 -
Rops11g03911 580 Pfam Multicopper oxidase 169 319 IPR001117 -
Rops11g03911 580 NCBIfam laccase 34 580 IPR017761 GO:0046274|GO:0048046|GO:0052716
Rops11g03911 580 SUPERFAMILY Cupredoxins 362 580 IPR008972 -
Rops11g03911 580 SUPERFAMILY Cupredoxins 32 182 IPR008972 -
Rops11g03911 580 Gene3D - 22 155 IPR008972 -
Rops11g03911 580 Gene3D - 384 580 IPR008972 -
Rops11g03911 580 CDD CuRO_2_LCC_plant 171 317 IPR034285 -
Rops11g03911 580 PANTHER MULTI-COPPER OXIDASE 34 565 IPR045087 -
Rops11g03911 580 FunFam Laccase 167 358 - -
Rops11g03911 580 FunFam Laccase 24 155 - -
Rops11g03911 580 CDD CuRO_1_LCC_plant 40 155 IPR034288 GO:0005507
Rops11g03911 580 ProSitePatterns Multicopper oxidases signature 2. 543 554 IPR002355 GO:0005507
Rops11g03911 580 ProSitePatterns Multicopper oxidases signature 1. 538 558 IPR033138 -
Rops11g03911 580 SUPERFAMILY Cupredoxins 163 357 IPR008972 -
Rops11g03911 580 CDD CuRO_3_LCC_plant 425 563 IPR034289 GO:0005507
Rops11g03911 580 Pfam Multicopper oxidase 430 562 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03911 Rops-Chr11 73147277 73150917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03911 K05909 - gmx:547704 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03911 11 73147277 73150917 Rops9g00787 9 12292621 12295832 PCT