Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03789 ATGTACCCAGAGCTAGAGACTTGGGCAGCTTTGGTTGCCATTTTGTGCTTCCTAGGCTTTATTCTGAAGGAAAATATTATGGGAGGGAAAAGCTCAAAAGGGTCTGGGAGGAGGCATGTTTCCTCATATGAGTCTGCTAGTTCTTCATCTTCATGGAATAACTATGGTGGATACCCTCCACAATCACCACACTCTCAGCAATCTCCATATGAAACACCTCAACACAATAGTGCATCAGCATCAGCTCCATTTTATGACTATGCTCAGCCAAAAAGGAAGTTGGATAGGAAATATTCCAGGATAGCCGATAATTACCGGTCACTGGATGAGGTTACTGCTGCTCTTGCAAATGCTGGGCTGGAATCTTCTAATCTCATTGTTGGCATAGATTTCACAAAGAGCAATGAGTGGACAGGGAAGAGGTCATTCAATCGAAAAAGTTTACATCACATTGGAAATGACCAAAATCCTTATGAACAAGCAATCTCTATTATTGGGAAGACTTTGTCTACTTTTGATGAGGATAACTTGATTCCTTGTTTTGGATTTGGAGATGCATCTACACATGATCAAGATGTATTTAGCTTCTATTCAGAAGACAGGTTCTGCAATGGGTTTGAGGAAGTTTTGACACGATACAGAGAAATTGTTCCTTACCTCAAACTTGCAGGACCCACTTCGTTTGCCCCTATTATTGAAATGGCCATGACTATTGTTGAGCAAAGTGGTGGCCAATATCATGTCTTGCTAATAATTGCAGATGGACAGGTGACCAGAAGCATCGACACACAGCATGGCCACTTAAGTCCACAGGAACAGAAGACAATAGATGCAATCGTAAAAGCCAGCGAGTATCCACTGTCAATAGTTTTAGTGGGAGTTGGAGATGGACCTTGGGATATGATGAGGGAATTTGATGATAACATCCCTTCTCGGGCATTTGACAATTTTCAGTTTGTGAATTTTGCTGAGATAATGACAAAGAATATAAATTCAACCCGGAAAGAGACAGAGTTTTCCCTTGCAGCTTTGATGGAGATACCTTCTCAATATAAGGCAACCATAGAGCTTGGCCTATTGGGTACTCGGAGGGGACATTCACCAGACAGGGTTCCTCTACCTCCACCTCTTTATAATAGGACTTCTTCCAGCATCCGTGCAAGATCTTCTTGGTCAAACAGTTTTCAGCAGAGTGCGCCTCCTCACACTAGCTATGATAGTAGCATTCAGACAGAACCATCTACAAACTCTTCATATGATAATAAGTGTTGCCCGGTTTGTCTTACCAATGGGAAGGACATGGCCTTTGGTTGTGGGCATCAGACTTGCTGTGGATGTGGAGAAGACCTCCAACCTGCTTTTAGTGGAAATTTCATTCATTGCCAGAATAAGGGCCGCAAAGAGATGTGCAGAGTTGGTCTAGATCTTTTCATGGATCATGAGTTTCTTGATCCTAAAAACTTCATTCTCAATTTTTAG 1479 0.4212 MYPELETWAALVAILCFLGFILKENIMGGKSSKGSGRRHVSSYESASSSSSWNNYGGYPPQSPHSQQSPYETPQHNSASASAPFYDYAQPKRKLDRKYSRIADNYRSLDEVTAALANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHHIGNDQNPYEQAISIIGKTLSTFDEDNLIPCFGFGDASTHDQDVFSFYSEDRFCNGFEEVLTRYREIVPYLKLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSIDTQHGHLSPQEQKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPSRAFDNFQFVNFAEIMTKNINSTRKETEFSLAALMEIPSQYKATIELGLLGTRRGHSPDRVPLPPPLYNRTSSSIRARSSWSNSFQQSAPPHTSYDSSIQTEPSTNSSYDNKCCPVCLTNGKDMAFGCGHQTCCGCGEDLQPAFSGNFIHCQNKGRKEMCRVGLDLFMDHEFLDPKNFILNF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03789 492 SUPERFAMILY vWA-like 124 306 IPR036465 -
Rops11g03789 492 PANTHER COPINE FAMILY PROTEIN 1 65 444 - -
Rops11g03789 492 MobiDBLite consensus disorder prediction 364 417 - -
Rops11g03789 492 MobiDBLite consensus disorder prediction 377 417 - -
Rops11g03789 492 Pfam Copine 147 360 IPR010734 -
Rops11g03789 492 SMART VWA_4 122 325 IPR002035 -
Rops11g03789 492 MobiDBLite consensus disorder prediction 46 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03789 Rops-Chr11 71543140 71547622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03789 K16280 - gmx:100798816 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00984 2 13796174 13806613 Rops11g03789 11 71543140 71547622 PCT