Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03710 ATGAGAACGAGGAGAGGGTTATGTTATCCTCGACTAGTTCCACTTCCAAGGATGTGTTCAGAAACACCCAAAATCTCTATCCCTAGCCGGAAAAGGCAGAAAAAATGGCCGGAAAGTTCCGCCGGAGATTCGGATTTCTTCGAATCTTTGCCTGACGACCTTGTCCTCTCTATTCTCTCCAAGCTTAGCTCCACCGCAACTTCACCCCCCGATTTTATTAATGTTCTAATCACGTGCAAGAGATTGAACACCTTAGGTCTTCACCCTCTCGTATTGTCAAAAGCATCCCATAAAACATTCTCAGTTAAAGCTAAAATCTGGTGTGACTCCGTTCATCGTTTCCTCAAACACTGTGCCGATGCCGGCAACATTGAAGCGTGTTACACTCTTGGCATGATTCGGTTTTATTGTTTGCAAAACAGAGGAAGCGGCGCGTCGTTGATGGCAAAAGCTGCGATGAACTCTCACGCGCCGGCTCTTTACTCGCTGGCGGTTATTCAGTTCAACGGCAGCGGCGGCACCAAAAACGACAAGGACCTTCGAGCCGGAGTGGCTCTATGCGCACGCGCCGGGTTTCTCGGTCACATCGACGCGCTGCGTGAGCTTGGTCATTGTTTGCAAGATGGCTACGGCGTTAAGCAAAACGTAACCGAAGGGCGACGGTTCCTGGTCCAAGCTAACGCCCGTGAACTCGCTGCCGTTTTGTCTTCGGGTAACAATAAACGTCCCTTGCTGACGTGGAGCTTCCACCCGGGTCCAAACCCGAATCCTAGGCTTCAAGCACTTGCCGGGTCGGGTTGTCCCTTGTTAAGTGATTTTGGTTGCAACGTGCCGGCTCCGGAGGCCCACCCAGCGAGCAGCTTCATGGCGGAGTGGTTTTCTATTCGGGGCGGGTCACCGGGTACGGGTATGAGGCTTTGTTCGCATTCGGGTTGTGGTCGACCCGAGACAAGGAAGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGCGGTGAATTATTGCTCACGCGCGTGTCAAGCGCTTGATTGGAAGTTTCGCCATAAGGCGGAGTGCGCCCCCGTGGAGAGGTGGCTCGATGAGGAGGGGGAACATGCCGCCGGCGAGGATGACGGTGTTGTCAACGGTGGTGACGGAGAGGTTGTGGCTGTGGTTGGTAGTTAG 1161 0.534 MRTRRGLCYPRLVPLPRMCSETPKISIPSRKRQKKWPESSAGDSDFFESLPDDLVLSILSKLSSTATSPPDFINVLITCKRLNTLGLHPLVLSKASHKTFSVKAKIWCDSVHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAGFLGHIDALRELGHCLQDGYGVKQNVTEGRRFLVQANARELAAVLSSGNNKRPLLTWSFHPGPNPNPRLQALAGSGCPLLSDFGCNVPAPEAHPASSFMAEWFSIRGGSPGTGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDEEGEHAAGEDDGVVNGGDGEVVAVVGS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03710 386 SUPERFAMILY HIT/MYND zinc finger-like 306 356 - -
Rops11g03710 386 SUPERFAMILY F-box domain 37 103 IPR036047 GO:0005515
Rops11g03710 386 Gene3D Tetratricopeptide repeat domain 109 241 IPR011990 GO:0005515
Rops11g03710 386 SUPERFAMILY HCP-like 113 226 - -
Rops11g03710 386 PANTHER MYND DOMAIN-CONTAINING 1 379 IPR044508 -
Rops11g03710 386 Gene3D - 301 355 - -
Rops11g03710 386 CDD F-box_SF 48 85 - -
Rops11g03710 386 FunFam Predicted protein 299 356 - -
Rops11g03710 386 ProSiteProfiles Zinc finger MYND-type profile. 309 351 IPR002893 -
Rops11g03710 386 Pfam MYND finger 312 351 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03710 Rops-Chr11 70742244 70743942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03710 - - gmx:100798136 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03710 11 70742244 70743942 Rops2g01352 2 19316421 19318222 PCT