Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03552 ATGGCGAACCCAGAGAGCAGTAGCATAGGCTCAAGATGGTCCCTCAAAGGAACCGCTGCACTCGTTACTGGCGGCACTAAAGGAATTGGGCACGCTGTGGTAGAGGAACTGGCAGAGTTTGGTGCCACTGTGTACACTTGTTCCAGGAATGAAGAAGAGCTGAACGGATGCTTAAAGGAGTGGAAAGATAAAGGTTTTTCAGTTTATGGATCGGTCTGTGATGTGTCTTCTCCACCCCAAAGAGAGAAGCTTCTTCAGCAAGTGACTTCTACCTTCAACGGCAAGCTCAACATACTTGTAAACAATGTTGGAACAAATTTGAGGAAGCCAACAATTGAGTATACAGCCGAAGAATATTCAAAACTGGTGACTACTAACTTGGACTCTGCATACCATCTATGCCAACTTGCATATTCTCTTCTTAAAGCATCTGGAAATGGAAGCATTGTGTTCATTTCCTCTGTTGCAGGCTTGGTAAATGTAGGTTCTGGAACCATTTATGCTGCGACCAAAGCTGCAATCAATCAGCTTACCAAATATCTTGCTTGTGAATGGGCAAAAGACAATATAAGGAGCAACTGTGTTGCACCCTGGTATACAAAAACACCACTTGTGGAACATTTGCTTGCTAACAAAGATTTGGTGAATGAGATATTAACTCGTACACCAATAAAGCGGATGGCAGAAGCACATGAAGTGTCATCCTTAGTGACATTCCTTTGCCTGCCAGCTGCTTCCTACATCACTGGACAGGTTATTTCTGTTGATGGAGGATTTACTGTGAATGGATTTCAACCCAGCATGAGAATTACTTGA 816 0.4338 MANPESSSIGSRWSLKGTAALVTGGTKGIGHAVVEELAEFGATVYTCSRNEEELNGCLKEWKDKGFSVYGSVCDVSSPPQREKLLQQVTSTFNGKLNILVNNVGTNLRKPTIEYTAEEYSKLVTTNLDSAYHLCQLAYSLLKASGNGSIVFISSVAGLVNVGSGTIYAATKAAINQLTKYLACEWAKDNIRSNCVAPWYTKTPLVEHLLANKDLVNEILTRTPIKRMAEAHEVSSLVTFLCLPAASYITGQVISVDGGFTVNGFQPSMRIT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03552 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 262 IPR036291 -
Rops11g03552 271 PANTHER TROPINONE REDUCTASE 12 263 IPR045000 GO:0016491
Rops11g03552 271 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Rops11g03552 271 FunFam Short-chain dehydrogenase reductase 4 265 - -
Rops11g03552 271 Gene3D - 8 263 - -
Rops11g03552 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Rops11g03552 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Rops11g03552 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Rops11g03552 271 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Rops11g03552 271 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Rops11g03552 271 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Rops11g03552 271 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Rops11g03552 271 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Rops11g03552 271 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03552 Rops-Chr11 67905143 67907053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03552 9 266 Miscellaneous Gene Families AT2G29290 63.846 2.19e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03552 K08081 - gmx:100819646 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03559 11 68027664 68031642 Rops11g03552 11 67905143 67907053 ECH
Rops11g03552 11 67905143 67907053 Rops11g03552 11 67905143 67907053 ECH