Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03370 ATGGCAGATAATCAAAGAATTCACCCTGCTCAAGATGTGGAAGCACCTTTGGTACCTGGGAACATTGTTAAATCTGATGGAGGAGGTTATCATCCACCACTTCCTCAACGTACCATTCCAGTGATGCATTCCAAGCCACCAAAAAAGAAAAGAAGTTGCTGCTGCAGGTTCATATGTTGGACTTTTAGCATATTGCTGATTTTGATAATTGCTATTGCCATTTCCATTGGAATACTATACCTTGTTTTTAGGCCAAAGCTTCCCAAATACTCAGTGGACAAACTGAGAGTAACCCAATTCAATTTATCTGACAATAACAACCTTTTTGTCACCTTCAATGTGACAATCACTGCTAGAAATCCAAACAAGAAGATTGGAATATACTATGAGGGTGGAAGCCATATAAGTGCTTGGTATAAGGACACACAACTATGTGAAGGGTCTATACTAAAATTCTACCAGGGTCATCAAAATACCACTGTGCTTGATCTGCCTTTGACTGGTCAAACACAGGATGCAACTGGCTTAACAAATGCACTTCAGCAACAGCTTCAACAAACAGGTGATGTCCCTCTCAATCTTAAGGTTAATCAACCTGTGAGGGTTAAGCTTGGTAAGTTGAAGCTCTTCAAAGTCAAGTTCAGGGTTAGGTGCAGGCTTGTGGTTGATAACATAGGTGCTAATAGTGATATTCGAATTGGGAACAGTAGTTGTAAGTTCAGGCTTAGGCTATGA 735 0.4027 MADNQRIHPAQDVEAPLVPGNIVKSDGGGYHPPLPQRTIPVMHSKPPKKKRSCCCRFICWTFSILLILIIAIAISIGILYLVFRPKLPKYSVDKLRVTQFNLSDNNNLFVTFNVTITARNPNKKIGIYYEGGSHISAWYKDTQLCEGSILKFYQGHQNTTVLDLPLTGQTQDATGLTNALQQQLQQTGDVPLNLKVNQPVRVKLGKLKLFKVKFRVRCRLVVDNIGANSDIRIGNSSCKFRLRL* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03370 244 SUPERFAMILY LEA14-like 69 202 - -
Rops11g03370 244 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 36 224 - -
Rops11g03370 244 Pfam Late embryogenesis abundant protein 115 219 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03370 Rops-Chr11 64816677 64817411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03370 30 244 EF-hand Containing Proteins AT5G21130 28.837 1.72e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03370 - - gmx:100789322 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03370 11 64816677 64817411 Rops11g03370 11 64816677 64817411 ECH
Rops11g03370 11 64816677 64817411 Rops9g01104 9 18125850 18126626 PCT