Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02615 ATGGCCACTTGTGTTGATTCTTCTACCCCTCCTCTTTCTAGGAAGCCAAACGGGTCACAAACCGATGATTGTTCTTTCAATTACGTGAAATTTTGCCGACCCAGTTTCTCTGATCGTGTTTCCTGCGTGCCCATTTGCAAGAATCGTGACAAGGCCTTGCATACACGCACGGTTGTGGAGGAATTGGTGCATGATGAGGTTGATTTGTGGCTGAAGATTCAGGAGGAAGCAAGGTTAGATGTGGATCAGGAACCAATTTTATCTAGCTATTATTTTAGTTCTATTTGTTCTCATAAATCGTTGGAAAGTGCTTTGGCAAATCAACTTTCTGTGAATTTGAGCAGTTTGAGCCTTCCTAGCAGTACCCTTTTTGATATTTTTATGGGAGTTTTGGTGGATGATGAAGATATTATAGGTGCTGTGAAGGATGATTTGAGAGCAGTGAAGGAGAGAGACCCTGCTTGCATTAGCTATGTGCATTGTTTGTTGAATTTCAAAGGCTTTTTTGCATGCCAAGCTCATAGGGTGGCTCATAAATTGTGGTTACAGGGGAGGAAGGTTTTAGCACTTTTGATTCAGAATAGGGTCTCTGAAGTTTTTGCAGTGGATATTCACCCTGGAGCCAAGATTGGACGTGGGATTTTGTTGGATCATGCAACTAGAGTTGTGGTTGGGGAGACAACTGTAATTGGGAATAATGTGGCAATTTTGCATAATGTTACATTGGGTGGAACAGGTAAGGTCTCTGGGGATAGACACCCAAAAATTGGTGATGGGGTTTTGATAGGTGCAGGGACTTGTATTTTGGGGAATATTAAGATTGGTGATGGAGCTAAGATTGGTGCTGGTTCAGTAGTTTTGAAGGAAGTTCCACCAAGAACTACTGCAGTTGGAAACCCAGCTAAATTGGTAGGAGGGAAGGATAACCCCATCAAATTGGATAAGATTCCTAGCTTTACCATGGACCATACTTCATATATATCTGAGTGGTCTGATTATGTTATCTAG 1008 0.4196 MATCVDSSTPPLSRKPNGSQTDDCSFNYVKFCRPSFSDRVSCVPICKNRDKALHTRTVVEELVHDEVDLWLKIQEEARLDVDQEPILSSYYFSSICSHKSLESALANQLSVNLSSLSLPSSTLFDIFMGVLVDDEDIIGAVKDDLRAVKERDPACISYVHCLLNFKGFFACQAHRVAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATRVVVGETTVIGNNVAILHNVTLGGTGKVSGDRHPKIGDGVLIGAGTCILGNIKIGDGAKIGAGSVVLKEVPPRTTAVGNPAKLVGGKDNPIKLDKIPSFTMDHTSYISEWSDYVI* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02615 335 Gene3D serine acetyltransferase, domain 1 54 202 IPR042122 -
Rops11g02615 335 Pfam Serine acetyltransferase, N-terminal 69 173 IPR010493 GO:0005737|GO:0006535|GO:0009001
Rops11g02615 335 MobiDBLite consensus disorder prediction 1 20 - -
Rops11g02615 335 FunFam Serine acetyltransferase 203 328 - -
Rops11g02615 335 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 262 290 IPR018357 GO:0016740
Rops11g02615 335 NCBIfam serine O-acetyltransferase 141 302 IPR005881 GO:0005737|GO:0006535|GO:0009001
Rops11g02615 335 SUPERFAMILY Trimeric LpxA-like enzymes 63 305 IPR011004 -
Rops11g02615 335 Pfam Bacterial transferase hexapeptide (six repeats) 253 287 IPR001451 -
Rops11g02615 335 PANTHER SERINE ACETYLTRANSFERASE 49 335 - -
Rops11g02615 335 CDD LbH_SAT 200 300 IPR045304 -
Rops11g02615 335 FunFam serine acetyltransferase 1, chloroplastic 53 202 - -
Rops11g02615 335 Gene3D Hexapeptide repeat proteins 203 321 - -
Rops11g02615 335 SMART SATase_N_2_a 69 173 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02615 Rops-Chr11 44765117 44766481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02615 69 323 Miscellaneous Gene Families AT2G17640 54.510 3.15e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02615 K00640 - gmx:100779106 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02615 11 44765117 44766481 Rops11g02615 11 44765117 44766481 ECH
Rops11g02615 11 44765117 44766481 Rops9g00232 9 2829845 2831287 PCT