Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02642 ATGGCCTCAGCTTCTGCAACTCTAATCAAGTCATCCCCTGTTCTTGACAAGTCTGAGTGGGTTAAGGGTCAGACCCTTCGCCAGCCTTCAGCTTCAGTTGTAAGATGCAACCCCACCACCCCTTCAGCCCTCACCATCCGAGCTGGTTCCTATGCTGATGAGCTCGTTAAGACCGCGAAAACTGTGGCTTCACCAGGGCGTGGTATTTTGGCCATGGATGAGTCAAATGCTACCTGTGGGAAGCGTTTGGCCTCTATTGGGCTTGAGAACACTGAAGCTAACCGCCAGGCATACCGTACCCTCCTTGTGACAGCTCCTGGTCTTGGTGAATACATCTCTGGTGCCATTCTCTTTGAGGAGACTCTTTACCAATCCACAGTTGATGGCAAGAAGATTGTCGATGTCCTTGTCGAGCAGAAGATTGTTCCTGGTATCAAGGTCGATAAGGGTTTGGTGCCCCTCGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTGGATGGTCTTGCTTCTCGCTCAGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCAGTCAAGGAAGCAGCCTGGGGTCTGGCTCGCTATGCTGCCATTGCACAGGACAATGGGTTGGTCCCAATCGTGGAGCCAGAGATCTTGCTTGATGGTGAACATGGCATTGACAGGACTTTCGAAGTAGCCAAAAAGGTGTGGGCTGAGGTTTTCTTCTACCTAGCTGAGAACAATGTCCTGTTTGAGGGTATTCTCCTCAAGCCTAGTATGGTTACTCCTGGAGCTGAGTCCAAGGACAAGGCCACTCCTCAGCAAGTTGCTGACTACACCCTCAAGCTCCTTCATAGGAGAATTCCCCCTGCTGTCCCTGGAATCATGTTTCTGTCTGGTGGACAATCTGAGGTTGAAGCAACCTTGAACTTGAATGCAATGAACCAATCTCCAAACCCATGGCACGTGTCCTTCTCATATGCCAGAGCCCTTCAAAACACCTGCTTGAAGACATGGGGAGGCCGTCCTGAGAATGTGAAGGCAGCACAAGATGCTCTCCTTTTCCGTGCCAAATCCAACTCACTTGCTCAGCTTGGAAAGTACACTGGTGATGGTGAATCTGAGGAAGCCACAAAGGGAATGTTTGTCAAAGGCTACTCTTACTAA 1197 0.5096 MASASATLIKSSPVLDKSEWVKGQTLRQPSASVVRCNPTTPSALTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGEYISGAILFEETLYQSTVDGKKIVDVLVEQKIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGEHGIDRTFEVAKKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDKATPQQVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTGDGESEEATKGMFVKGYSY* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02642 398 FunFam Fructose-bisphosphate aldolase 36 397 - -
Rops10g02642 398 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 259 269 IPR029768 -
Rops10g02642 398 Pfam Fructose-bisphosphate aldolase class-I 54 398 IPR000741 GO:0004332|GO:0006096
Rops10g02642 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 49 398 IPR000741 GO:0004332|GO:0006096
Rops10g02642 398 SUPERFAMILY Aldolase 44 398 - -
Rops10g02642 398 Gene3D Aldolase class I 33 397 IPR013785 -
Rops10g02642 398 NCBIfam fructose-bisphosphate aldolase class I 54 374 - -
Rops10g02642 398 CDD FBP_aldolase_I_a 52 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02642 Rops-Chr10 45752704 45755176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02642 51 398 Miscellaneous Gene Families AT3G52930 56.250 1.05e-135 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02642 K01623 - gmx:100818915 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02642 10 45752704 45755176 Rops10g02642 10 45752704 45755176 ECH
Rops10g02642 10 45752704 45755176 Rops3g00483 3 6242880 6245832 ECH