Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02106 ATGGCTTGTTTGGCACTTCGTCCAGTGTATGAAGAATCTTTTAACACCCGTGGTGAATTTACCAGTGGTTTTAGTCCTCATTTGAGGGATTCAATTTTGATTTACCTAACTGTTGGTGGATCGGTGATTCCCATGCATATTATGGAGACGGATTCAATTGCTTCAGTGAAGCTGAGAATTCAAACCTTTAAAGGATTTTTTGTAAAAAAACAGAAACTGGTTTTTGAAGGGAAGGAATTAGCTCGTAACAAATCTTGTATCCGTGATTATGGTGTTGCCGACGGGAATGTGTTGCACCTTGTGCTAAGGCTTTCTGATCTTCAAGCTATTACAGTTAGGACTGCATGTGGAAAGGAGTTTGGGTTTTATGTCCAGAAGAATAGGAATGTGGGTTATGTGAAGCAACAGATTGCAAGGAAAGGGCAAGGATTCCTGGATCTTGAGGATCAAGAATTGATATGTGAGGGTGAGGCAGTTGAAGACCAGAGACTTATTGAGGATATCTGTAAGGACAATGATGCTGTAATTCATTTTTTGGTCAGGATATCAGATGCCAAGGTAAGGACTAAGCCAGTTGAGAAGGATGTTGAATTATCAATTGAGGCATCATCTGCACACAATGTGGTGCCAAATTTAGGTGCAGGCCGGTCAGGGTCAGTGTCTATAACAAATAAGGTCCTGAAGAGGAACCAATTGACAAGAGATTTTCTTTTGGAACCAATTATTATGAATTCCAATATCAAAATTCCACTAGTGATCCAGAAGCTAATTAAGATTACTTCAGATGGGTTAGAAAAAGGCAGGAAACCTATTCAATCTTCCGAGGGATCAGGAGGAGCTTATCTCATGCAAGATCCATCTGGCTTAAAGTATGTTGCTGTTTTCAAGCCTATTGATGAGGAGCCAATGGCAATTAATAATCCTCGAGGCCTACCCGTCTCTGTGGATGGTGAGGGGTTAAAGAAAGGCACACGAGTAGGGCAAGGTGCATTGAGAGAAGTTGCAGCATACATTCTGGATCATCCTAGGAAAGGACCTCGCTCATATCATAACAAGGAGGAACAGGGGTTTGCTGGAGTTCCTCCTACAGTTATGGTTAAATGCTTGCATGAAGGATTCTACCATCCTGAAGGTTATAAGAATGTTTCAGGTAATGTTAAAATGGGATCTCTTCAGATGTTTATGAGGAATATTGGAAGTTGTGAAGACATGGGCCCTAGTGCATTTCCAGTGGAAGAGGTACACAAGATCTCCGTGCTGGATATCAGGTTGGTAAATGCTGATAGGCATGCTGGGAACATTTTGGTTGCCAAGGATGGTGAAGATGGTCCAACTGTACTTATTCCAATTGATCATGGCTATTGCTTACCTGAGAGCTTTGAAGACTGCACTTTTGACTGGTTATACTGGCCACAAGCTCAAGAGCCTTACTCCCCAGACACCATTGAGTACATAAAATCTCTGGATGCTGAAGTAGATATTAAGCTTTTGAAGTTTCATGGATGGGACCTTCCTCCTGAATGTGCCCGGATCCTCCGCATATCAACCATGCTTCTAAAGAAAGGCGCAGAGAGAGGACTCACTCCTTTCACCATTGGAAGCATTATGTGTAGAGAAACACTGAAGAAAAAATCTGTCATTGAGCAGATTATTCAGAAAGCGGAGGAATCTGCACTTCCTGGAACAGGTGAAGCTGCATTTCTTGATCTTGTTTCAGTGATCATGGATAGTCATTTAGAAGAGCTATTCCCATGA 1755 0.4194 MACLALRPVYEESFNTRGEFTSGFSPHLRDSILIYLTVGGSVIPMHIMETDSIASVKLRIQTFKGFFVKKQKLVFEGKELARNKSCIRDYGVADGNVLHLVLRLSDLQAITVRTACGKEFGFYVQKNRNVGYVKQQIARKGQGFLDLEDQELICEGEAVEDQRLIEDICKDNDAVIHFLVRISDAKVRTKPVEKDVELSIEASSAHNVVPNLGAGRSGSVSITNKVLKRNQLTRDFLLEPIIMNSNIKIPLVIQKLIKITSDGLEKGRKPIQSSEGSGGAYLMQDPSGLKYVAVFKPIDEEPMAINNPRGLPVSVDGEGLKKGTRVGQGALREVAAYILDHPRKGPRSYHNKEEQGFAGVPPTVMVKCLHEGFYHPEGYKNVSGNVKMGSLQMFMRNIGSCEDMGPSAFPVEEVHKISVLDIRLVNADRHAGNILVAKDGEDGPTVLIPIDHGYCLPESFEDCTFDWLYWPQAQEPYSPDTIEYIKSLDAEVDIKLLKFHGWDLPPECARILRISTMLLKKGAERGLTPFTIGSIMCRETLKKKSVIEQIIQKAEESALPGTGEAAFLDLVSVIMDSHLEELFP* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02106 584 Gene3D - 109 183 - -
Rops10g02106 584 Pfam Ubiquitin family 110 181 IPR000626 GO:0005515
Rops10g02106 584 Pfam Ubiquitin family 38 104 IPR000626 GO:0005515
Rops10g02106 584 ProSiteProfiles Ubiquitin domain profile. 108 185 IPR000626 GO:0005515
Rops10g02106 584 Pfam Phosphatidylinositol 3- and 4-kinase 276 532 IPR000403 -
Rops10g02106 584 CDD Ubl_ubiquitin_like 110 177 - -
Rops10g02106 584 SUPERFAMILY Ubiquitin-like 37 105 IPR029071 -
Rops10g02106 584 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 41 557 IPR044571 -
Rops10g02106 584 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 267 566 IPR000403 -
Rops10g02106 584 FunFam Phosphatidylinositol 4-kinase gamma 4 29 108 - -
Rops10g02106 584 Gene3D - 28 107 - -
Rops10g02106 584 SMART ubq_7 32 103 IPR000626 GO:0005515
Rops10g02106 584 SMART ubq_7 108 181 IPR000626 GO:0005515
Rops10g02106 584 SUPERFAMILY Ubiquitin-like 104 183 IPR029071 -
Rops10g02106 584 ProSiteProfiles Ubiquitin domain profile. 30 103 IPR000626 GO:0005515
Rops10g02106 584 SUPERFAMILY Protein kinase-like (PK-like) 418 578 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02106 Rops-Chr10 38237053 38241098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02106 1 581 Acyl Lipid Metabolism Gene Families AT5G24240 62.371 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02106 - - gmx:100812724 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01636 4 39760780 39763839 Rops10g02106 10 38237053 38241098 ECH
Rops10g02106 10 38237053 38241098 Rops10g02106 10 38237053 38241098 ECH