Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01809 ATGAGTGTAGATCTTAAAAGAACTGCCTCTAACGGCCATGAGAAAATGTTACTACCACAAGAACAGCAGGAAATGATCATTGAGGTGAGAAGGTTGATAGGGCCATTATCAGATAAGGCATCTGTGTATTGTTCTGATGCATGCATCTCAAGGTATTTAAGCTCACAGAATTGGGATGTCGATAAGGCAGTTCAAATGTTGAAACAGAGCCTAAAATGGAGAGAAGAATACAAACCTGAAGAGATCCGCTGGGAAGAGGTTTCTGATGTAGCAGAGGCAGGGAAGATGTATAGACCAAATTATTATGACAAGCAGGGGAGATCAATGATTGTAATGAGACCAAGTCGCAAGAGCTCAAAGTCAATAGAAGAACAGATGAGGTATTTTGTTTACTGCTTGGAGAATGCCATTTTAAATCTTCCACCACACCAGGAACAGATGGTCTGGTTGATTGATTTCCAGGGTTTCAATTACTCACATATATCATTCAGGGAGGCACGTGAAACTGCCCATGTAATACAAGAATATTATCCAAAGCGACTGGGTTTGGCAATAATGTACAATGCACCATGGAGCTTCCAACCATTCTTCTCGATGGTAAAGTCCATGTTAGAGCCGGATACTTATAATAAAGTAAAGTTTGGTTATTCTAACGACCACAACACACAGAAGATTATGGAGGAATTGTTTGATATGGATCATCTTGAATCTGCATTTGGTGGGAATGATGGCACAGAATTCGACATAAATAAATATGCTGAGAGAATGAAAGAGGAAGACAATAAGATGCACTCTTTCTGGACTAACTCTCTATCTTCAGTCTCACATGATGTTCCTTCTTAA 843 0.3962 MSVDLKRTASNGHEKMLLPQEQQEMIIEVRRLIGPLSDKASVYCSDACISRYLSSQNWDVDKAVQMLKQSLKWREEYKPEEIRWEEVSDVAEAGKMYRPNYYDKQGRSMIVMRPSRKSSKSIEEQMRYFVYCLENAILNLPPHQEQMVWLIDFQGFNYSHISFREARETAHVIQEYYPKRLGLAIMYNAPWSFQPFFSMVKSMLEPDTYNKVKFGYSNDHNTQKIMEELFDMDHLESAFGGNDGTEFDINKYAERMKEEDNKMHSFWTNSLSSVSHDVPS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01809 280 Pfam CRAL/TRIO domain 100 241 IPR001251 -
Rops10g01809 280 CDD SEC14 89 242 IPR001251 -
Rops10g01809 280 Gene3D - 3 278 IPR036865 -
Rops10g01809 280 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 83 247 IPR001251 -
Rops10g01809 280 PANTHER GH16843P 9 269 - -
Rops10g01809 280 SUPERFAMILY CRAL/TRIO domain 84 262 IPR036865 -
Rops10g01809 280 FunFam Phosphatidylinositol transfer protein 3 5 276 - -
Rops10g01809 280 SMART sec14_4 90 244 IPR001251 -
Rops10g01809 280 SUPERFAMILY CRAL/TRIO N-terminal domain 18 86 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01809 Rops-Chr10 33668447 33670778 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01809 K26544 - gmx:100777106 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01524 9 25733076 25739441 Rops10g01809 10 33668447 33670778 PCT