Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00966 ATGGTTGAAAACACTTCTACCACCAACCAGAGCCACCCTCAAGATTTTGACACGGTGGAGCATTCCATAGATGGTGTCCCTTCACAAACTGACTCCAAATTCTACGATGATGATGGCCGTCTCAAAAGGACAGGAACTGTTTGGACTACAAGCTCGCACATAATAACAGGTGTTGTGGGATCTGGGGTGTTGTCCTTAGCATGGTCCATGGCTCAAATGGGTTGGATTGCTGGTCCTGTAGTGATGCTCTTTTTCAGTGTCATCACTTTGTATACTTCATCACTTCTAGCTGAATGTTATCGATATGGTGACCCCAATAGTGGAAAGAGAAATTATACCTTCATGGAAGCAGTTCACACCATTCTCGGTGGGTACAATGATACGTTTTGTGGGATAGTTCAGTACTCAAATCTTTACGGCACTGCAATAGGATACACAATTGCGGCTTCCATTAGCATGACGGCAATAAGAAGGTCTGACTGTTTCCATTCCTCAGGAGGAAAAAACCCATGTCACATTTCAAGCAACCCATACATGATCAGTTTTGGAGTAATCCAAATTATCTTTTCTCAAATTCCAGATTTTCATAACATGTGGTGGCTCTCAATACTTGCAGCAATCATGTCTTTCACCTATTCCATTATTGGCCTCGCTCTTGGAATTGCCAAAGTTTCAGAAACGGGTACCATCAAGGGTAGTCTCACAGGAGTAAGCATTGGAACTGTAACAGAAGCTCAAAAAGTATGGGGAACTTCCCAAGCTCTTGGTAACATAGCCTTTGCCTATTCATATTCTCAAATTCTCATTGAAATTCAGGACACCATAAAATCTCCACCATCTGAAGTGAAAACAATGAAGAAGGCTGCAAAGATAAGTATTGGAGTGACCACAACATTTTATCTTCTTTGTGGCTGCTTTGGATATGCTGCTTTTGGAGACACAGCACCTGGGAACCTACTCAGTGGATCTGGTTTCTATAACCCATATTGGCTTATTGATATTGCTAATGCTGCAGTGGTGATTCACATTGTGGGAGCATACCAAGTGTATGCCCAACCCCTCTTTGCCTTCATCGAGAAAGGGGTAGTAAAAAGATGGCCCGAAGTTAACAAGGAATACAAAATTCCAGTTCCTGGTTTTCCTCCTTACAATCTAAACGCATTTAGATTAGTATGGAGAACGGTGTTTGTTATCACAACCACCGTTATAGCAATGTTGATTCCATTCTTTAATGATGTTTTGGGATTCCTAGGAGCACTTGGGTTTTGGCCTTTAACAGTTTATTTTCCAGTGGAGATGTATATCTCACAGAAGAAGATCCCAAAATGGAGTGGGAGATGGATTTGTATGCAAGCGTTAAGTGTTGTCTGCCTTATAGTATCAGCTGTGGCTGCTGTTGGCTCAGTGGTTAGTGTGGTGCTTGACTTAAAGAAATACAAACCATTCGTCTCAGACTACTAA 1461 0.4189 MVENTSTTNQSHPQDFDTVEHSIDGVPSQTDSKFYDDDGRLKRTGTVWTTSSHIITGVVGSGVLSLAWSMAQMGWIAGPVVMLFFSVITLYTSSLLAECYRYGDPNSGKRNYTFMEAVHTILGGYNDTFCGIVQYSNLYGTAIGYTIAASISMTAIRRSDCFHSSGGKNPCHISSNPYMISFGVIQIIFSQIPDFHNMWWLSILAAIMSFTYSIIGLALGIAKVSETGTIKGSLTGVSIGTVTEAQKVWGTSQALGNIAFAYSYSQILIEIQDTIKSPPSEVKTMKKAAKISIGVTTTFYLLCGCFGYAAFGDTAPGNLLSGSGFYNPYWLIDIANAAVVIHIVGAYQVYAQPLFAFIEKGVVKRWPEVNKEYKIPVPGFPPYNLNAFRLVWRTVFVITTTVIAMLIPFFNDVLGFLGALGFWPLTVYFPVEMYISQKKIPKWSGRWICMQALSVVCLIVSAVAAVGSVVSVVLDLKKYKPFVSDY* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00966 486 Pfam Transmembrane amino acid transporter protein 43 472 IPR013057 -
Rops10g00966 486 MobiDBLite consensus disorder prediction 1 31 - -
Rops10g00966 486 FunFam Amino acid permease 6 40 476 - -
Rops10g00966 486 PANTHER OS05G0424000 PROTEIN-RELATED 36 470 - -
Rops10g00966 486 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00966 Rops-Chr10 20905886 20911900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00966 14 486 Organic Solute Cotransporters AT5G09220 68.973 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00966 K24917 - gmx:100813602 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00966 10 20905886 20911900 Rops9g02519 9 47377507 47380080 PCT