Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00649 ATGAATGGGAACCATTCCCCATCTAAGGAAACCTTAACTCAAATCAAGTCCCCAAGGAGTTCCATGAGTCCACAAAGATGCCAAAGTGCTGCTCCCAATTTCCCGGATGATGGGGTGGTCGAGCCGTCGATTGAGCAGCTTTATGAAAATGTGTGTGATATGCAGAGTTCTGATCAGTCACCCTCAAGGCAAAGTTTTGGATCTGATGTTGATGAGTCTAGAATCGATTCTGAACTGCATCATCTAGTTGGAGGACGGATGAGGGAGGTGGAGATAATGGAAGAGGAAGTGGAGGTGGAAAAAAGGCAAGGAGCGAGTTCAAGTTGTGAAATTTCTTCTGAAACGGGTAGTGTATCCAATGATAAGAAGGTGGATAAGGTGGATGAGATTCGATCTGCAACAAGTTCTGTTTCCTCAGAAAAATCTGTCAAAGCATTGAACTCACAGTTGGGTCCTGATACTTCACCAAAATCAAGACCCAAAGGAAAAAGTCCTGCAAAACCTCCTGTGGAGAGAAAGAATGACAAGCCTTTAAGGAAACAAATTAGTGGAATTACTGGCACGAAGAAATCAAAGAATTCTCCTTTGAGAAAGTCAGTGTCACAAAATCGAATTGAGAATTCAGCTGAATCAGCATTAGATAGACCAGAGCGGGCTCCAATATTATTAAAGCAAGCAAGAGATCTGATTTCATCCGGAGATAATCCGCAGAAAGCTCTTGAATTGGCTCTTCAAGCAATGAATCTGTTTGAGAAGCTTGGTAATGGGAAACCAAGTTTGGACCTGGTTATGTGTTTACATGTTACATCAGCAATATATTGCAGCTTGGGTCAATACGACAAGGCAATTCCAATTCTTGAGCGCTCAATTGAGATTCCTGTTGTTGGGGAAAGTCAACAGCATGCCCTTGCTAAATTTGCTGGTCACATGCAACTAGGAGACACCTATGCTATGCAGGGCCAGCTTGAGAATTCAATTATGTGCTACACTGCTGGGTTTGAAGTACAGAAGCAGGTTTTGGGAGAAACAGACCCTAGAGTTGGTGAAACTTGTCGTTACGTGGCTGAAGCTAATGTTCAAGCTTTGCAATTTGATGAAGCAGAGAGGTTCTGTCAAGTGGCTCTTGACATTCATAAAGCAAACAGTTCAGTCCCATCTCTTGAAGAGGCAGCTGATAGGAGGCTAATGGGCCTCATATGTGAAACAAAGGGAAATCATGAAGCAGCACTTGAGCATCTTGTTTTAGCCAGCATGGCAATGGTAGCAAATGGCCAGGAAGTGGAAGTGGCGTTTGTTGACTGCAGCATTGGAGACACATACTTATCATTGTCTCGTTATGATGAGGCTGTCTTTGCGTATCAGAAAGCACTAACAGTTTTCAAGACCAGCAAAGGAGAGAATCATCCAGCAGTAGGATCAGTCTTTGTACGTTTGGCTGACTTGTATAACAGGACAGGGAAGATAAGGGAATCAAAATCATATTGTGAGAGTGCACAAAGAATATATGATAATCCAATGCCTGGAGTTACTCCAGAGGAGATTGCTAGTGGTCTTACGAGTATTTCAACTATCTATGAATCATTGAATGAGCATGAACAGGCACTCAAGTTATTGCATAAAGCACTGGAGATATATAATGATGCCCCTGGTCAGCAAGGCACAATAGCAGGAATTGAAGCTCAGATGGGGGTCATGTACTACATGTCGGGGAACTACACTGAATCTTACAACACTTTGAAGAATGCTATTTCCAAGCTTCGTGCTATTGGAGAGAAGAAATCATCCTTCGTCGGTGTTGCTCTTAATCAAATGGGACTTGCCTGTGTGCAGCGTTATGCCTTAACCGAGGCTATAGAATTATTTGAAGAAGCAAAGAGTATTTTGGAACATGAGTATGGACCTTATCACCCTGAAACACTTGGGGTATATAGTAATCTTGCTGGCACGTACGATGCAATTGGCAGGTTGGATGATGCAATTCAAATCCTTGAGTACGTTGTTAGCATGAGGGAGGAAAAGCTTGGAACAGCAAATCCTGACGTGGATGATGAGAAGAGAAGGTTGGGTGAGTTGTTGAAGGAAGCAGGTAGAGTTCGGAGCAGAAAAGCCAGGTCACTTGAGAACCTTCTTGATGGCAATGCTCACACTGCAAACAACCTTGTCATCGAGGCCTGA 2175 0.4322 MNGNHSPSKETLTQIKSPRSSMSPQRCQSAAPNFPDDGVVEPSIEQLYENVCDMQSSDQSPSRQSFGSDVDESRIDSELHHLVGGRMREVEIMEEEVEVEKRQGASSSCEISSETGSVSNDKKVDKVDEIRSATSSVSSEKSVKALNSQLGPDTSPKSRPKGKSPAKPPVERKNDKPLRKQISGITGTKKSKNSPLRKSVSQNRIENSAESALDRPERAPILLKQARDLISSGDNPQKALELALQAMNLFEKLGNGKPSLDLVMCLHVTSAIYCSLGQYDKAIPILERSIEIPVVGESQQHALAKFAGHMQLGDTYAMQGQLENSIMCYTAGFEVQKQVLGETDPRVGETCRYVAEANVQALQFDEAERFCQVALDIHKANSSVPSLEEAADRRLMGLICETKGNHEAALEHLVLASMAMVANGQEVEVAFVDCSIGDTYLSLSRYDEAVFAYQKALTVFKTSKGENHPAVGSVFVRLADLYNRTGKIRESKSYCESAQRIYDNPMPGVTPEEIASGLTSISTIYESLNEHEQALKLLHKALEIYNDAPGQQGTIAGIEAQMGVMYYMSGNYTESYNTLKNAISKLRAIGEKKSSFVGVALNQMGLACVQRYALTEAIELFEEAKSILEHEYGPYHPETLGVYSNLAGTYDAIGRLDDAIQILEYVVSMREEKLGTANPDVDDEKRRLGELLKEAGRVRSRKARSLENLLDGNAHTANNLVIEA* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00649 724 MobiDBLite consensus disorder prediction 184 209 - -
Rops10g00649 724 Coils Coil 528 548 - -
Rops10g00649 724 SUPERFAMILY TPR-like 237 543 IPR011990 GO:0005515
Rops10g00649 724 ProSiteProfiles TPR repeat profile. 515 548 IPR019734 GO:0005515
Rops10g00649 724 MobiDBLite consensus disorder prediction 49 68 - -
Rops10g00649 724 MobiDBLite consensus disorder prediction 164 179 - -
Rops10g00649 724 MobiDBLite consensus disorder prediction 131 155 - -
Rops10g00649 724 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 28 714 - -
Rops10g00649 724 SMART tpr_5 348 381 IPR019734 GO:0005515
Rops10g00649 724 SMART tpr_5 430 463 IPR019734 GO:0005515
Rops10g00649 724 SMART tpr_5 306 339 IPR019734 GO:0005515
Rops10g00649 724 SMART tpr_5 556 589 IPR019734 GO:0005515
Rops10g00649 724 SMART tpr_5 640 673 IPR019734 GO:0005515
Rops10g00649 724 SMART tpr_5 472 505 IPR019734 GO:0005515
Rops10g00649 724 SMART tpr_5 515 548 IPR019734 GO:0005515
Rops10g00649 724 SMART tpr_5 598 631 IPR019734 GO:0005515
Rops10g00649 724 Pfam Tetratricopeptide repeat 518 546 IPR019734 GO:0005515
Rops10g00649 724 ProSiteProfiles TPR repeat profile. 430 463 IPR019734 GO:0005515
Rops10g00649 724 SUPERFAMILY TPR-like 433 669 IPR011990 GO:0005515
Rops10g00649 724 MobiDBLite consensus disorder prediction 1 213 - -
Rops10g00649 724 Pfam Tetratricopeptide repeat 599 671 - -
Rops10g00649 724 Pfam Tetratricopeptide repeat 435 503 - -
Rops10g00649 724 Pfam Tetratricopeptide repeat 231 292 - -
Rops10g00649 724 SUPERFAMILY TPR-like 561 715 IPR011990 GO:0005515
Rops10g00649 724 MobiDBLite consensus disorder prediction 69 103 - -
Rops10g00649 724 Gene3D Tetratricopeptide repeat domain 307 416 IPR011990 GO:0005515
Rops10g00649 724 Gene3D Tetratricopeptide repeat domain 201 306 IPR011990 GO:0005515
Rops10g00649 724 MobiDBLite consensus disorder prediction 1 30 - -
Rops10g00649 724 Gene3D Tetratricopeptide repeat domain 592 703 IPR011990 GO:0005515
Rops10g00649 724 Gene3D Tetratricopeptide repeat domain 417 591 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00649 Rops-Chr10 15890067 15893855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00649 - - gmx:100791625 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04004 2 73212337 73220145 Rops10g00649 10 15890067 15893855 ECH
Rops10g00649 10 15890067 15893855 Rops10g00649 10 15890067 15893855 ECH
Rops2g04004 2 73212337 73220145 Rops10g00649 10 15890067 15893855 PCT