Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00339 ATGAGCTTTGCTGCACCATCACTTGGTTCTGCTGGTGTTAGATCTGCTAGAAGAGCATTTGAGTTTGGAAGAACCTATGTTGTTAGGCCTAAAGGTAAACACCAAGCAACTATAGTTTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACGCTAGCTCTTCCTAATATTAAATGGATATGTCCAACCGCTCCTACTCAGCCAATAGCTATATTTGGTGGCTTTCCTTCTACTGCTTGGTTTGATGTGGGAGACCTTTCAGAAGATGCTCCGGATGATCTAGAAGGTTTGGATGCTTCAGCTGCACATGTTGCAAATTTGTTGTCCACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGCATGGGAGCAGCTACTGCTCTTTACTCTGCATCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCGGCCAACTTAAGTGCAGCTGTGGGTTTAAGTGGCTGGCTTCCATGTGCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCCACAAGACGTGCTCAGTCCCTTCCCATTTTGCTGTGTCATGGAAAAGGTGATGATGTGGTTCCCTTTAAATTTGGTGAGAAATCATCAACGTGCTTAAGTTCAACCGGATTTCAGGATGTAACTTTTAAAGCATATAATGGGCTTGGACACTACACAATTCCTGGAGAGATGGATGAGCTTTGTGCTTGGCTGAAGTCAAAATTGGGCCTTGAGGGGAGTTCTGCCTAG 777 0.4543 MSFAAPSLGSAGVRSARRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLALPNIKWICPTAPTQPIAIFGGFPSTAWFDVGDLSEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSASCFTAGKYGNGNPYPANLSAAVGLSGWLPCAKTLSNKLQGVDEATRRAQSLPILLCHGKGDDVVPFKFGEKSSTCLSSTGFQDVTFKAYNGLGHYTIPGEMDELCAWLKSKLGLEGSSA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00339 258 Pfam Phospholipase/Carboxylesterase 26 248 IPR003140 GO:0016787
Rops10g00339 258 Gene3D alpha/beta hydrolase 17 252 IPR029058 -
Rops10g00339 258 SUPERFAMILY alpha/beta-Hydrolases 26 251 IPR029058 -
Rops10g00339 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00339 Rops-Chr10 9628741 9636693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00339 1 255 Acyl Lipid Metabolism Gene Families AT5G20060 75.686 5.24e-145 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00339 K06130 - gmx:100791683 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00339 10 9628741 9636693 Rops4g02217 4 48862319 48865384 ECH
Rops10g00339 10 9628741 9636693 Rops7g00160 7 2236935 2240434 ECH
Rops10g00339 10 9628741 9636693 Rops10g00339 10 9628741 9636693 ECH