Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2662 ATGTCTCTCTCTGTTCCCAAGTTTGCGCACCCTCTTCCTCTTCCTCTTCAGCACAGATCCAATGGCTGCTCCATGTCTTTCCACACGTTCACTCCCTTCCTTGGATCCACTCACAAGCTTCGTTTCACTGCCCCCGTTAAGCTCAATGCTCGCTCTAATTCCATTGTTGTCTCTGTCTCCGATGCTGTCAAGAACAAGAAGCTCAAATCAGCCAACAATCTGCTTATTACGAAAGAGGAGGGCTTGCTGCTCTACGAAGACATGACTTTAGGCAGGTTCTTTGAAGACATGTGTGCCCAGATGTATTATAGAGGCAAAATGTTTGGCTTTGTTCACTTGTACAATGGCCAAGAAGCTGTGTCAACTGGCTTCATCAAGCTTCTCAAGAAAGAAGACTCGGTGGTGAGTACATACCGGGACCATGTTCATTCACTGAGTAAGGGGGTGCCAGCGCGTGCTGTAATGAGTGAGCTCTTTGGGAAGGCCACGGGATGCTCCCGAGGTCAAGGTGGCTCTATGCATATGTTTTCAAAGGAACATAATGTGATCGGTGGGTTTGCTTTCATTGCTGAAGGAATCCCTATTGCCACTGGGGCAGCATTTTCCAGCAAGTATAGAAGGGAGGTTTTGAAAGAGGCAGACTGTGATCATGTGACATTGGCATTTTTTGGAGATGGAACATGTAACAATGGACAGTTCTACGAATGCCTAAACATGGCAGCTTTATGGAAATTGCCTATTGTGTTTGTGGTGGAAAATAATCTGTGGGCTATTGGGATGTCACATCTCAGGGCAACTTCCGATCCTCAAATATGGAAGAAAGGGCCAGCATTTGGAATGCCTGGGGTTCATGTTGATGGGATGGACGTTTTGAAGGTCAGGGAGGTGGCAAAGGAGGCTATTGAAAGAGCCAGACGAGGAGAAGGACCGACTTTAGTAGAATGTGAGACCTATAGATTTAGAGGACATTCATTGGCCGATCCTGATGAGCTTCGTGACCCTGCTGAGAAGGCACATTATGCTGATAGGGATCCCATCTCTGCACTGAAGAAATACTTGATTGGGAACAAATTAGCCAGTGAACAAGAGTTGAAGGCCATAGAGAATAAGATTGATGAGGTTCTTGAGGAGGCAGTTGAGTTTGCAGATGAGAGCCCTCTTCCACCACGCAGCCAGCTTCTAGAGAATGTCTTTGCTGATCCAAAAGGTTTTGGAATTGGACCTGATGGCAAGTACAGATGCGAGGACCCAAAATTCACTCAAGGCACTGCTCATGTCTAA 1281 0.4668 MSLSVPKFAHPLPLPLQHRSNGCSMSFHTFTPFLGSTHKLRFTAPVKLNARSNSIVVSVSDAVKNKKLKSANNLLITKEEGLLLYEDMTLGRFFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHSLSKGVPARAVMSELFGKATGCSRGQGGSMHMFSKEHNVIGGFAFIAEGIPIATGAAFSSKYRREVLKEADCDHVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHYADRDPISALKKYLIGNKLASEQELKAIENKIDEVLEEAVEFADESPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTQGTAHV* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2662 426 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 24 426 - -
Pvu9g2662 426 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 79 399 IPR017597 GO:0004739|GO:0006086|GO:0043231
Pvu9g2662 426 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 76 401 IPR029061 -
Pvu9g2662 426 Coils Coil 357 384 - -
Pvu9g2662 426 CDD TPP_E1_PDC_ADC_BCADC 84 382 - -
Pvu9g2662 426 Pfam Dehydrogenase E1 component 88 388 IPR001017 GO:0016624
Pvu9g2662 426 Gene3D - 45 408 - -
Pvu9g2662 426 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 24 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2662 Pvu-Chr9 37047379 37050660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2662 31 426 Acyl Lipid Metabolism Gene Families AT1G01090 83.081 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2662 K00161 - gmx:100802573 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2662 9 37047379 37050660 Pvu10g1246 10 38847999 38851283 PCT