Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2613 ATGGGTGTTTTTGCTCACGATGATGAGAACTCCTCCACATTGGCTCCAGCAATATTGTACAAAGCTCTGACCAAAGATTCAGACAGAATCATCCCAAAGGTTCTTCCTGTCATCCAGAGCATTGAAACTATTGAAGGAAATGGTGGACCTGGAACCATCAAGAAGCTAACAGCTACTGAAGGTGGCGTAACAGGTTTTGTGCTGCAGAGAATCGATGCAGTGGACGAAGCAAACCTGGGATTCGACTACAGCATAGTGGGAGGACCAGGGTTGCATGAAAGTTTGGAGAAAATCACACTTCAGACGAAGGTGGTGGCTGCTCCTGATGGTGGCTCCATCTCCAAGGTCTCTGTCAAATACCACACCAAAGGCGATGCACCTCTCTTAGAGGCAGTGCTCGAAGAGTCAAAGGCAAGAGGAACTGGTTTTTTCAAGGCTGTTGAGAGTTACGTGTTGGCAAACCCTGCAGAATACTAG 477 0.4759 MGVFAHDDENSSTLAPAILYKALTKDSDRIIPKVLPVIQSIETIEGNGGPGTIKKLTATEGGVTGFVLQRIDAVDEANLGFDYSIVGGPGLHESLEKITLQTKVVAAPDGGSISKVSVKYHTKGDAPLLEAVLEESKARGTGFFKAVESYVLANPAEY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2613 158 Gene3D - 2 157 IPR023393 -
Pvu9g2613 158 SUPERFAMILY Bet v1-like 11 156 - -
Pvu9g2613 158 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2613 158 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2613 158 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2613 158 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2613 158 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2613 158 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2613 158 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2613 158 Pfam Pathogenesis-related protein Bet v 1 family 9 154 IPR000916 GO:0006952
Pvu9g2613 158 PANTHER - 1 156 - -
Pvu9g2613 158 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 88 120 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pvu9g2613 158 PANTHER ABA-RESPONSIVE PROTEIN 1 156 - -
Pvu9g2613 158 CDD Bet_v1-like 8 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2613 Pvu-Chr9 36572686 36574486 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2613 - - gmx:100305867 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2613 9 36572686 36574486 Pvu9g2613 9 36572686 36574486 ECH
Pvu3g1132 3 27013976 27014992 Pvu9g2613 9 36572686 36574486 PCT
Pvu9g2613 9 36572686 36574486 Pvu3g1138 3 27273368 27274163 PCT