Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2606 ATGTTTGTGGCATTGCTCTTGCTGGTGGCATTGAGCAATGCCGTGAGAGTTAGTGGAGATGGTGGGCAATGTGGTTCCAACCCAACACTAAACCCAAGACCACACAGTGTCTCCATTTTGGAGTTTGGTGCAGTTGGAGATGGTAGAACACTCAACACCATTGCGTTCCAGAATGCCATCTTCTATCTTAAGTCATTTGCCGATAAGGGTGGCGCTCAGCTCTATGTTCCTCCGGGTAAATGGCTCACTGGAAGCTTCAATCTTACCAGCCATCTCACCCTCTTTTTGGAAAAAGGTGCTGTCATTATTGGATCTCAGGATCCAACTCACTGGGATGTTATTGAACCCTTGCCTTCTTATGGCCGAGGCCTTGAAGTTCCTGGGGGAAGATATCAGAGCTTGATAAATGGATACATGTTACATGATGTGGTCGTAACAGGTAACAATGGAACCATTGATGGCATGGGAATGGTTTGGTGGGAGTGGTATAGCTCCCATTCCTTGAACCACAGCCGGCCTCATCTGGTTGAAATTGTAGCATCTGATTATGTGGTGGTTTCAAATCTTACATTCTTGAATGCCCCAGCTTATAGCATCCACCCGGTTTATTGCAGCCATGTACATATTCAAAATGTTTCAATCTCTACTCCTCCAGAATCTCCTTATACTGTTGGTATAGTGCCAGATTCTTCTGAATATGTGTGTATAGAAGATTGTATTGTTGGCATGGGATTTGATGCAATTTCTCTAAAAAGTGGGTGGGATGAGTATGGCATTGCCTATGGCAGGCCAACTGAGAATGTACACATCAGAAGGGTGCATCTTCATGCATTTTCTGGCTCTGCTCTTGCTTTTGGCAGTGACATGTCTGGTGGCATTTCAAATGTTCTAGTGGAGCATGCTCATCTTTTGAAGTCAAACAGTGGCATTGAGTTTAGAACCACCAGAGGAAGAGGTGGTTATATGAAAGATATTGTTATATCAGACATACAAATGGAAAATGTGCACACAGCAATTGCTGCCACTGGTAATTGTGGTTCTCATCCTGATGACAAGTTTGATCCAAATGCACTCCCACTTTTGGATCACATTACCTTGAGGGATGTCACAGGTAAAAATATCACCATTGCTGGAAACTTTGCTGGAATAGAGGAATCCCCTTTCACAAACATATGCCTTTCCAACATAACCTTGTCTACAAATTCTGTTTCTCCCATTACTTGGGAATGCTCAAATGTGTCTGGATTTGCAGACTCAGTGCTCCCAGAACCATGTCCTGAACTTGGAACTCCATCATATGATTCTTCCTCCTCCTGTTTCTACCTTCACAGTATCAGTGGAAAAATTGCAGTGCAGTGA 1359 0.4364 MFVALLLLVALSNAVRVSGDGGQCGSNPTLNPRPHSVSILEFGAVGDGRTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGAVIIGSQDPTHWDVIEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTIDGMGMVWWEWYSSHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPDSSEYVCIEDCIVGMGFDAISLKSGWDEYGIAYGRPTENVHIRRVHLHAFSGSALAFGSDMSGGISNVLVEHAHLLKSNSGIEFRTTRGRGGYMKDIVISDIQMENVHTAIAATGNCGSHPDDKFDPNALPLLDHITLRDVTGKNITIAGNFAGIEESPFTNICLSNITLSTNSVSPITWECSNVSGFADSVLPEPCPELGTPSYDSSSSCFYLHSISGKIAVQ* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2606 452 SUPERFAMILY Pectin lyase-like 32 429 IPR011050 -
Pvu9g2606 452 Pfam Glycosyl hydrolases family 28 135 414 IPR000743 GO:0004650|GO:0005975
Pvu9g2606 452 PANTHER PECTIN LYASE-RELATED 2 446 - -
Pvu9g2606 452 Gene3D - 26 418 IPR012334 -
Pvu9g2606 452 PANTHER POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN 2 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2606 Pvu-Chr9 36532500 36535554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2606 1 440 Glycoside Hydrolase AT3G16850 63.122 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2606 - - gmx:100777503 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2606 9 36532500 36535554 Pvu9g2606 9 36532500 36535554 ECH
Pvu3g1128 3 26962519 26965518 Pvu9g2606 9 36532500 36535554 PCT