Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2585 ATGTTTAAGATGGTTGCGGAGGAGAAACCCCAAAAGACATACCCGACAACTGCTCAGGTAGTGGATGAGTTAAAGAGAATGGGGGACATAGGAGTTCCAATAGCAGCCATGAGCCTTGTGGGATACATCAAAAACATGGTGTTAGTTGTGTGCATGGGAAGGTTGGGAAGCCTTGAGTTAGCTGGTGGTGCTTTGGCCATAGGCTTCACCAACATAACTGGTTTCTCTGTGCTCTCAGGTCTAGCCATGGGAATGGAACCTCTCTGCACGCAAGCCTTTGGTTCAAGAAACTTCTGTTTGCTCTCTCTCACTTTACAAAGGACAATCTTCATGTTATTGGCAGCTTCACTACCCATTTCTCTATTGTGGCTCAAGCTTGAGCCTCTCATGCTATGGCTTCACCAGAACCCTGAGATAACCACAGTCGCAAGCCTCTATTGCCGCTTCTCCATCCCAGACCTCATTGCCAACAGCTTCCTTCACCCAATTCGAATCTATTTACGTAGCAAAGGAACAACTTGGCCTCTACTATGGTGCACTTTACTCTCCATTCTCATACACATCCCTGTGGTCACTTTTTTCACCTTCAAACTCCACCTTGGTGTTCCAGGGATTGCCATGTCAGCTTTTGTTGCCAACTTCAACACCCTTTTCTTCCTCCTATCATACATGCTCTACATGCAAGTCTCAAAGGGCTCACTTTCCATGCCTTTATTAATATCTCGCACCAGTGCTATCAGTGCAACAACAACAACGACAGCAACAGCAACAGCAACCACAGCAACAACCTCGTGGGGCATACTAATAAGGTTTTCCATTCAGAGTTGTTTGGGAGTGTGTTTGGAATGGTGGTGGTACGAGTTCATGACAATTCTAGCGGGTTACCTTCACAACCCGCGTGTGGCCTTGGCCACTGCTGGCATAGTGATTCAAACGACGTCTCTCATGTACACTTTACCAACAGCACTGAGTGGTTCGGTGTCAACAAGAGTGGGGAATGAACTCGGGGCGGGTCAACCCGAGAGGGCAAGGTTGTCAAGTATTGTGGCAATAGGAATGGCTCTTTCAAGTTCAATATTGGGGTTGTTAGGGACCACATTGGGGAGAGAGAGATGGGGGAGGGTTTTCACTAGTGATAGTGAGGTGTTGGAACTTACCATGAGTGTTTTGCCCATAATTGGGGTTTGTGAGTTAGCAAATTGCCCTCAAACCACAAGCTGTGGAATCCTTAGGGGAAGTGCTAGGCCTGGTGTTGGGGCAGGGATAAACTTCTATTCATTTTACTTGGTGGGGGCACCAGTGGCTATAGTGATGGCATTTGTTTGGAGACTAGGGTTGGTGGGTCTTTGCTATGGGCTGTTGGCAGCACAGATAGCATGTGTGGTCTCTATTCTAGTTGTGGTATACAACACAGATTGGGAAAGGGAGTCATTGAAGGCAAAAACCTTGGTTTCATGTCACACAATGGAACATGGAGACCAAACACTAGTCAAATGTGAAGAAGGTCTTGTCTTTCTCAATCACAAGAACATCTCCCAAAACTGA 1545 0.468 MFKMVAEEKPQKTYPTTAQVVDELKRMGDIGVPIAAMSLVGYIKNMVLVVCMGRLGSLELAGGALAIGFTNITGFSVLSGLAMGMEPLCTQAFGSRNFCLLSLTLQRTIFMLLAASLPISLLWLKLEPLMLWLHQNPEITTVASLYCRFSIPDLIANSFLHPIRIYLRSKGTTWPLLWCTLLSILIHIPVVTFFTFKLHLGVPGIAMSAFVANFNTLFFLLSYMLYMQVSKGSLSMPLLISRTSAISATTTTTATATATTATTSWGILIRFSIQSCLGVCLEWWWYEFMTILAGYLHNPRVALATAGIVIQTTSLMYTLPTALSGSVSTRVGNELGAGQPERARLSSIVAIGMALSSSILGLLGTTLGRERWGRVFTSDSEVLELTMSVLPIIGVCELANCPQTTSCGILRGSARPGVGAGINFYSFYLVGAPVAIVMAFVWRLGLVGLCYGLLAAQIACVVSILVVVYNTDWERESLKAKTLVSCHTMEHGDQTLVKCEEGLVFLNHKNISQN* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2585 514 TIGRFAM matE: MATE efflux family protein 33 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g2585 514 PANTHER PROTEIN DETOXIFICATION 55 15 489 - -
Pvu9g2585 514 Pfam MatE 33 190 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g2585 514 Pfam MatE 276 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu9g2585 514 CDD MATE_eukaryotic 23 479 IPR045069 GO:0042910|GO:1990961
Pvu9g2585 514 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2585 Pvu-Chr9 36317774 36320026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2585 K03327 - gmx:100785533 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2585 9 36317774 36320026 Pvu9g2585 9 36317774 36320026 ECH
Pvu3g1106 3 26488917 26491271 Pvu9g2585 9 36317774 36320026 PCT