Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2569 ATGGGTGCGATGACCACTAACCGCAAGCGCACCCAAGAATGCATCAACGTCAACTACACCAATTCGGATCCCTCCCGTAAACGCTCCAAATTATCCACCAAACCCGTTCCGTCCGCCGCCACCGTCGTCGCGCGACTCTCCCGGTATCCGGAACTTTACGCGCCGTTGCCGAGGGAGGTTCACGCGCCCTGCCGGCGGACAAAATTTCCACTCGCTGCTAGGGTTGGCGCTCGCGGGAGCGACGCCATGGGGAACGTTCTGATCGCGAAGTTCGAGAAGGCGAAGCGTTCGGCGTTGGCGAAGTATAGGACCGTGGTGGAGAAGTGGAAGGAGGTGATTGTAGTGGACGCGGAGAGTGATGAGCCTTGCGCGGATTCGAGTGTGGAAGAGCCGCGTGGTGATGGTGACAGGTTTGGGGTTCAGCAGCAGTCGCTGTCGACGTTGTCATTTGATTCGGGGCTGAGGAATGCGGAGTTGAAGGTGGCGAGTGGAGGGAAGTTGTGGGGTCCTGAGACGCAGCTTGATGTTGAAAATGTTCATGCGTATAAGAAGTTGCTTGAGGATGTTGGGAGGAGAAATGGCACGTTTCAGAGGCTGAATTTTGAGATTAACCTGAATGAGAAGCGCAGGGACCATTTTAATTTGTTGAGGCCTAAGAAGGAATTGGATGAGGAACCAGAAGTGCTGCAAGAACCATTTGTTGCTCTTAGTAGTGAGGAAGAAGACGAGGTTGAACGTGCCTTCTCTGCCAACCGGTGGACAATCTTGGTTACCCATGAAAATTCTAATATTGAGATTACTGGAGAAAAGTTTCGGTGCCTTAGGTCAACTGGATGGTTAAATGATGAGGTGATAAATTTGTACTTAACATTGCTGAAGGAGAGGGAACAAAGACAGTCACATAAATTTCTGAAATGTCATTTTTTCAATACCTTTTTCTACAAAAAGTTAATAAGTGGTCCGAATGGTTATGATTTCAAATCTGTCAGAAGATGGACAAGCCAACGGAAATTGGGATACAGTTTACTTGAATGTGATAAAATATTTGTACCTATCCATCAAGAGATACATTGGTGCTTGGCAGTTATCAATAATGAAGATAAGAAATTGCAGTATCTTGACTCAATGAAAGGAGAGGATAGTTCTGTGCTAGAAAAGCTGGCTAAATATTTTGCGGATGAAGTAAATGACAAGAACGGAAAAGATATTGGTGTAAATACCTGGAAAAAAGAATTTGTGAAAGACCTTCCTGTTCAGAAAAATGGGTGTGATTGTGGGGTGTTTATGATCAAATATGTGGACTTTTATAGCAGGGGCCTGGAGCTGTATTTTGACCAGGAAAACATGCCTTACTTCCGGCGTAGGACAGCCAAGGAGATCTTGAGATTGAAAGCTGAATGA 1401 0.464 MGAMTTNRKRTQECINVNYTNSDPSRKRSKLSTKPVPSAATVVARLSRYPELYAPLPREVHAPCRRTKFPLAARVGARGSDAMGNVLIAKFEKAKRSALAKYRTVVEKWKEVIVVDAESDEPCADSSVEEPRGDGDRFGVQQQSLSTLSFDSGLRNAELKVASGGKLWGPETQLDVENVHAYKKLLEDVGRRNGTFQRLNFEINLNEKRRDHFNLLRPKKELDEEPEVLQEPFVALSSEEEDEVERAFSANRWTILVTHENSNIEITGEKFRCLRSTGWLNDEVINLYLTLLKEREQRQSHKFLKCHFFNTFFYKKLISGPNGYDFKSVRRWTSQRKLGYSLLECDKIFVPIHQEIHWCLAVINNEDKKLQYLDSMKGEDSSVLEKLAKYFADEVNDKNGKDIGVNTWKKEFVKDLPVQKNGCDCGVFMIKYVDFYSRGLELYFDQENMPYFRRRTAKEILRLKAE* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2569 466 ProSiteProfiles Ubiquitin-like protease family profile. 264 436 IPR003653 GO:0006508|GO:0008234
Pvu9g2569 466 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 171 - -
Pvu9g2569 466 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 176 465 - -
Pvu9g2569 466 Gene3D Adenoviral Proteinase; Chain A 222 464 - -
Pvu9g2569 466 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 171 - -
Pvu9g2569 466 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 176 465 - -
Pvu9g2569 466 Pfam Ulp1 protease family, C-terminal catalytic domain 279 460 IPR003653 GO:0006508|GO:0008234
Pvu9g2569 466 SUPERFAMILY Cysteine proteinases 232 464 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2569 Pvu-Chr9 36145675 36151989 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2569 K08592 - gmx:100802161 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1102 3 26279558 26285673 Pvu9g2569 9 36145675 36151989 PCT