Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2560 ATGGATACAAAACCTTCTCAACTTGCTTCACAACCTTTCAACTATCAGACATGGTTCTTGAAAGTTTCAATCCACTGTGAAGGTTGCAGGAGGAAAGTAAAGAAAGTTCTGAAGAGCATTGATGGTGTTTTCACTGCAACAATAGACCCACAGCAGAACAAAGTAACAGTCACTGGAAATGTTGCTTTGGAGACCCTTCTCAAGAAGCTGGTCAGAGCCGGGAAACAAGCCGAGATTTGGCCGGAGAATGAAGGAAAAATCTCCGGCAAAGGGCTGAAGAAGAAGAAGAAGAAGGATGAAGCAAGAGAGCCACAGAGTGTGGAAAAACACAAGGGAACTGAAAATGCTTCTGCCAAGTGTAACAGTGAGAACAAAAGCAGCAGCAACAACTCGCCGGAGAAGTGCTCCTCCGGTGACCAGATGCCGTCGAAGGGTGGTCGGAGCGAAGGTGGTGGCGGCGCTGCTAAGAAGAAGAAGAATTTTTTTTGCCAGAGTGGTTTGAGTTCAGTGGAAGCAGCTACTGGTGCACCTGCACACACTGGATTGCAGTTTCAGGATTTTGTGGGCCCAGTGAATGTGGACCCTACACGTCAGCATTCGCTTTTCTATCCAGAAAGTGGTGTTGCAGCTTATAACAGATTGTATCCTTGTTACTACTTTCCATCCTCACCCTACACGTGTGCTGGTCTAGACCAAGATGGCCATCACTTTCAATCAGCACCGTTGGTTTCATTTGAGATCTTCAGTGATGAAAATGTTAATGGGTGTTCTGTTATGTGA 780 0.4615 MDTKPSQLASQPFNYQTWFLKVSIHCEGCRRKVKKVLKSIDGVFTATIDPQQNKVTVTGNVALETLLKKLVRAGKQAEIWPENEGKISGKGLKKKKKKDEAREPQSVEKHKGTENASAKCNSENKSSSNNSPEKCSSGDQMPSKGGRSEGGGGAAKKKKNFFCQSGLSSVEAATGAPAHTGLQFQDFVGPVNVDPTRQHSLFYPESGVAAYNRLYPCYYFPSSPYTCAGLDQDGHHFQSAPLVSFEIFSDENVNGCSVM* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2560 259 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Pvu9g2560 259 MobiDBLite consensus disorder prediction 94 116 - -
Pvu9g2560 259 Pfam Heavy-metal-associated domain 22 73 IPR006121 GO:0046872
Pvu9g2560 259 CDD HMA 20 78 IPR006121 GO:0046872
Pvu9g2560 259 Gene3D - 14 79 - -
Pvu9g2560 259 ProSiteProfiles Heavy-metal-associated domain profile. 23 79 IPR006121 GO:0046872
Pvu9g2560 259 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 10 101 - -
Pvu9g2560 259 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 104 259 - -
Pvu9g2560 259 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 10 101 - -
Pvu9g2560 259 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 104 259 - -
Pvu9g2560 259 MobiDBLite consensus disorder prediction 82 153 - -
Pvu9g2560 259 MobiDBLite consensus disorder prediction 117 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2560 Pvu-Chr9 36090083 36091595 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2560 - - vra:106761779 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2560 9 36090083 36091595 Pvu9g2560 9 36090083 36091595 ECH
Pvu3g1090 3 26031816 26033527 Pvu9g2560 9 36090083 36091595 PCT