Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1090 ATGGATGCAAAATCTCCCCAAGCTGTTGTACCCTCAGCCTCAGAGCCATTGATGTATCAGACTTGGTTCTTGAAAGTTTCCATCCACTGTGAAGGTTGCAGGAGGAAAGTGAAGAAGGTTTTACAGAGCATTGATGGTGTTTTCACCACAACGGTTGACGCGCAGCAGCAGAAAGTGACGGTCACTGGAAGCGTCGGCGTTGAGACCCTCATAAGGAAACTGGCGAAAGCCGGAAAACACGCCGAGATTTGGCCGGAAGACAAACAGCAACAGCAGCAGAAGGGAAATAACTCCGGCAAAGACAAGCAGCAGCAGCAGAAGAAGAAGAAAAACGAACAAGGAGAAGAATCCGAAAGCAAGAACAATGAGTCTACAACAAGAAATGCAGAGATTACCAGTAGCACTACCAACTCCAGCAAAAAAAAGGTGAACGAAAAGAGTGGCGAGAGAGGCAACGCGAAAAGCAAGAGCAGCGGCGGCGGAGAAAATGATTCAGCGGAAGCGGAGAACAAGGGTGGTAAAAGTGAGGGAGGTGGGAAGAAAAAGAAGAAGAAAGAGATGGAGAAAAGTGAGAGTGGTGGGAGTTCAGGATGTAACGGTGGAGGTGCGCACAGTGGATCCCCTGGGCAGGTGAATCTGAGCCCTACACGTCAGCAATCATACCTGTATCCTGAAACTTACTGTTATCCCCCGCTTGTGTATCTGGCAACTCACAACAGGTTATGTCCCATGGGAACAATGGGTGGTCCTTCCTACTATGTCTCACCACTCCCCTACATGTGTGCAGGCATCGACCACGACCCTTATCGCCTTCAATCTACGCCCTTCGTTCCCTTCGAGATCTTCAGCGATGACAATGCCAACGCCTGTTCTGTCATGTGA 882 0.4955 MDAKSPQAVVPSASEPLMYQTWFLKVSIHCEGCRRKVKKVLQSIDGVFTTTVDAQQQKVTVTGSVGVETLIRKLAKAGKHAEIWPEDKQQQQQKGNNSGKDKQQQQKKKKNEQGEESESKNNESTTRNAEITSSTTNSSKKKVNEKSGERGNAKSKSSGGGENDSAEAENKGGKSEGGGKKKKKKEMEKSESGGSSGCNGGGAHSGSPGQVNLSPTRQQSYLYPETYCYPPLVYLATHNRLCPMGTMGGPSYYVSPLPYMCAGIDHDPYRLQSTPFVPFEIFSDDNANACSVM* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1090 293 MobiDBLite consensus disorder prediction 79 215 - -
Pvu3g1090 293 MobiDBLite consensus disorder prediction 192 215 - -
Pvu3g1090 293 Gene3D - 15 90 - -
Pvu3g1090 293 Pfam Heavy-metal-associated domain 26 80 IPR006121 GO:0046872
Pvu3g1090 293 MobiDBLite consensus disorder prediction 101 123 - -
Pvu3g1090 293 CDD HMA 24 82 IPR006121 GO:0046872
Pvu3g1090 293 MobiDBLite consensus disorder prediction 124 141 - -
Pvu3g1090 293 MobiDBLite consensus disorder prediction 167 191 - -
Pvu3g1090 293 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 293 - -
Pvu3g1090 293 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 1 293 - -
Pvu3g1090 293 Coils Coil 100 120 - -
Pvu3g1090 293 SUPERFAMILY HMA, heavy metal-associated domain 16 85 IPR036163 GO:0046872
Pvu3g1090 293 ProSiteProfiles Heavy-metal-associated domain profile. 27 83 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1090 Pvu-Chr3 26031816 26033527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1090 - - gmx:100808829 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1090 3 26031816 26033527 Pvu9g2560 9 36090083 36091595 PCT