Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2555 ATGGAATACAGAACCTTGGAACTCAACATCGTATCAGCAAAAGACATAAAGAATGTTAATCTTTTTTCCAAGATGGACGTTTACGCCGTCGTTTCGCTCACCGGTGACCCTTTTCATCTTCAGAGTGCAACCACCCAGGTGGACAAAGACAGCGGCAGCAACCCCAAGTGGAACTTTCCGGTGAAATTCTCCGTCAACGAGGCTTTGGCCAAGGAGAACCGTTTGACCCTCGAGATCAAGCTCTTCTCCGACCGCACCCTCGGCGACACCCTCATCGGCACCGTCCATGTTCCTCTCAGGGAGCTCGTCGACAACCCCGGCGACGACAACGGCTCCCGAAACGTCAGCTACAAGGTCTTGAAATCTTCTGGAAAATCCAAGGGATCGTTGAATTTCTCTTACAAATTCGCCGAAAAAGTTTCTAATTCGGTCCCCGCCGGCAGCGTGGCCGCCGCCGCATCGAAAACAGGAGCGGAGCCGGTGATGGCTTACCCACCGCAGACATCCGCCGGATCGAGTGCAATTCCTTACGGAACGTCACATCCTCCGCCGCCGAATCCGGCTGCGCAATATGGATACCCGCCCCAACAACCGGCTTACGGTGGATATCCGCCCCAACAACCGGGATATGGGTATCCACCGCAACAACAGAGCTACGGTGGATATCCACCACAAAATGGATATGGTGGATACCCGCAACAGAATGGTTATGGATACCCACAAGGATACCCACAACAAGGTGGATATGTGCAACAAGCCCAGAAACCGAAGAAGAACAAGTTTGGAATGGGGTTGGGGGCTGGGTTGCTTGGTGGGGCCTTGGGGGGTATGTTGATCGGAGATATGGTGTCTGATGCTGCGGATTATGATGCCGGTTACGATGCTGGATTTGATGATGCTGGTGGATTTGATTTTTGA 918 0.5283 MEYRTLELNIVSAKDIKNVNLFSKMDVYAVVSLTGDPFHLQSATTQVDKDSGSNPKWNFPVKFSVNEALAKENRLTLEIKLFSDRTLGDTLIGTVHVPLRELVDNPGDDNGSRNVSYKVLKSSGKSKGSLNFSYKFAEKVSNSVPAGSVAAAASKTGAEPVMAYPPQTSAGSSAIPYGTSHPPPPNPAAQYGYPPQQPAYGGYPPQQPGYGYPPQQQSYGGYPPQNGYGGYPQQNGYGYPQGYPQQGGYVQQAQKPKKNKFGMGLGAGLLGGALGGMLIGDMVSDAADYDAGYDAGFDDAGGFDF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2555 305 MobiDBLite consensus disorder prediction 178 211 - -
Pvu9g2555 305 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Pvu9g2555 305 Gene3D C2 domain 4 138 IPR035892 -
Pvu9g2555 305 PANTHER PROTEIN SRC2 1 245 - -
Pvu9g2555 305 Pfam C2 domain 5 104 IPR000008 -
Pvu9g2555 305 MobiDBLite consensus disorder prediction 163 233 - -
Pvu9g2555 305 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Pvu9g2555 305 PANTHER INGRESSION PROTEIN FIC1 1 245 - -
Pvu9g2555 305 MobiDBLite consensus disorder prediction 212 233 - -
Pvu9g2555 305 SMART C2_3c 5 111 IPR000008 -
Pvu9g2555 305 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 137 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2555 Pvu-Chr9 36051361 36052593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2555 - - gmx:100217337 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2555 9 36051361 36052593 Pvu9g2555 9 36051361 36052593 ECH
Pvu3g1085 3 25910135 25911295 Pvu9g2555 9 36051361 36052593 PCT