Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1085 ATGGAACACCGAACGCTACTACTCAGCCTCGGATCGGCCAAGGATCTAAAAAAAGTAAATTTCTTCTCCAAGATGGACGTGTACGCCGTCGTTTCGCTCTCCGGCGTTCAAAAGATTAAGACTCCCGTCGACAGAAACGGCGGCGCCAACCCCACGTGGAACGTAACCGAGAACATAACTATCAACGAATCGCTCGCACGCCAGAACCGCTTGACCCTCGAAATCAAGCTCCGCTGCGAGCGCAACCTCTCCACCGACAAGGAAATCGGCCAGGTCCTCGTCCCCGTCAAGGAGCTTCTCGACCAACCCGGTGACGGAAAATCCTTCCAGCATGTTAGTTACCAGGTCAGAAAACCCTCCGGCAAGCCCAAAGGAGCGCTCAGTTTTTCATACAAATTTAGCGAAAAAATCACAGCGCCCGGGAAAGAGTCAGCGCCGTCAGCGCCGGTGCTCTCGGTTGCTCACATGACAGAGCCGGTCACGGCTTATCCTGCTCCTTCTGTGGGGTCCACTTCTGCCTATCCAAGCGTGTATCCTCCTCCACCGCCGCTACAACATGCGGCCGGATATGCGTACCCTCCGCCGCCACAAGCGGGATATGCGTACGGTCCACAAGCGGCTTACGGATACGCGCCACAACCCGGGCACGGTTACCCTTCTGCTCCTGCTCAAAAAGCTGGGAAGAACAAATTTGGAATGGGATTGGGAGCGGGTTTGCTTGGAGGAGCATTGGGTGGGCTTCTAATCGGAGACATGATATCTGATGTTGGTTCTTGCGATGCTGGTGGATTTGATTTTTAA 801 0.5456 MEHRTLLLSLGSAKDLKKVNFFSKMDVYAVVSLSGVQKIKTPVDRNGGANPTWNVTENITINESLARQNRLTLEIKLRCERNLSTDKEIGQVLVPVKELLDQPGDGKSFQHVSYQVRKPSGKPKGALSFSYKFSEKITAPGKESAPSAPVLSVAHMTEPVTAYPAPSVGSTSAYPSVYPPPPPLQHAAGYAYPPPPQAGYAYGPQAAYGYAPQPGHGYPSAPAQKAGKNKFGMGLGAGLLGGALGGLLIGDMISDVGSCDAGGFDF* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1085 266 Gene3D C2 domain 2 157 IPR035892 -
Pvu3g1085 266 Pfam C2 domain 7 106 IPR000008 -
Pvu3g1085 266 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Pvu3g1085 266 CDD C2_SRC2_like 12 129 IPR044750 GO:0006952
Pvu3g1085 266 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
Pvu3g1085 266 SMART C2_3c 5 108 IPR000008 -
Pvu3g1085 266 PANTHER INGRESSION PROTEIN FIC1 1 259 - -
Pvu3g1085 266 PANTHER OS01G0934100 PROTEIN 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1085 Pvu-Chr3 25910135 25911295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1085 - - gmx:100784458 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1085 3 25910135 25911295 Pvu3g1085 3 25910135 25911295 ECH
Pvu3g1085 3 25910135 25911295 Pvu9g2555 9 36051361 36052593 PCT