Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2544 ATGAAGGAGGATACTGAGCTTGAGGAAGGAGAGGCTTTCTATTACAAGGATGATGATGATGAAGACAACATTGACCCTGATTCTTTCTCATACATTGATGAGAAGATTCAGCATGTTCTTGGCCATCTTCAAAAGGAATTTGAAGGTGGTGTATCTGCTGAGAATTTGGGTGCAAAATTTGGTGGCTATGGTTCCTTTTTACCCACCCAAGAGCGCTCTCCTTGTCTATGGTCTCATCCAAGAACTCCACAAAGAAACCATCGCTCACCAAAGCTTAATAACAATCCTCACATGGAGGCTGTGTTTCATAACCAAAAAGCACCTACAAATGTGCCTCATCCTTCAAGGCCTGAAAATGCTTCTCATAGTTCACATCCATTTCGTGATTTAAGAGAAGCTTTAGTAAATGATTCAGTGAAGAAAGAACATGGAAATTCTTCCAGTGATATACCTGAGAGGTGCACTTTGAAAGATGATACTACAAAAAATACAGCGAATTCAACTGATCAAAGGACACTGAAGTTTCGAATCAAAATGAAATCTAATATCTTGTCACAAAAGAATGCAGAAATCTATAGTGGCCTTGGACTTGATGACTCTCCCTCATCCTCAATGGATAACAGCCCTGCGGAAAGTGAAGGCACGCAACCTGTATCTCAAGAGAGTGCGGAAAATTCTCCAACTGGCATTATTCAGGTTATGAGTTATTTTCCTATCCCTGGGGGTGTTCTGATATCTCCTCTACACAAAAGTGTGCTCAACCTGATTAAAAATGATAATAAAGCTATTGGAGACACCAAGGTTTCGTCCTCTCTTAATGGTCATCAAGATCCTTGTTCTATGTCCACTGACGAATCAGATTCTTTTGTGGGGACTGGACATTTGAAGAAGAACACTGTGAGAATAGTGAAACAAAGTGAAAAACAGTTGGAATTGAAGCATCCAAATGGTACCTTTTCTGAGAAGGATATTACATTGCATAAAAAGAAAAAATTAGGAAATAGAACACCTGATTGTAAAGATTTCCTGCCTAATGAATTGAAATGGACACCTCCGTCGAGCTCAATTTGTGATGCTGGTGAAACTGCTGAAGTCACTGCTAAAGCTTCTGAAGCCTCCAAGGAGGTTAATGGGAATGGGGTGCTAGGCAGAATGGTTTCTGAAGAAGCATTGAAGGAAGAGTCATTAGAATCAATATCTGGTCAAGATTTTGGGAAGACTGCAATGCAAAATGTAGGAAATGGTTTTCTGAAAAATGCTCTAGAACATAAACTGGAAAGTTCCCGCAAGGATAATTCTACAGATCCTATGAATAATAACACGAGTAATACTTTCATTAGGTTCAATAAGGTTGAACGTGAGGCATTGAAATGTAAGGCAGATCATAAGTCTGAGACTCATCAGAAAATAAAGGCTGTGTCTGAGCGGAAGAAGAAGTCAAAAGGTGACCAGAGTCCTGAAAAAGCAGGGGCAGTTGCAAGAAAAAAAAGCTTTGGTGGTACTGATAATGCAATGGCAATTGAGAAAGGGAGTGCTGGCTATGACAATACTTGTAGTAGTAAAATAAAGTCAAGCTCACTGGACAAAAAGTTCAGTGGTAACAGGGATTCAATGAAAGAAAAAAGATCAGAACGGAAAGTTGACAGTCTTGCTGGTAATGGTAGAATGAAAAATGCAAAAATTAGTAACGGAAAACAGAGTGCATTTGGGATTAAAGTAAATGAGAGAATGAGTGGTCATAAAGTGATAAACCAGGTGCTAGCTGGACCATGCATTAATGATACTTCGGCTTCTATTCCTATAGCTGGAAACAACCTTGCACCTGAGATGATTTCATCTGCAGTAGCTGCACCTCAACTTATTGCAGAAGATTGGGTATGTTGTGACAGTTGCCAGACATGGAGGCTTCTACCTACTGGTACGAAGCCTGACCACCTTCCAGAGAAATGGCTGTGTAGCATGCTAGATTGGCTGCCTGGGATGAATTCTTGTAAGTTCAGTGAGGATGAGACAACAAAAGCACTTTATGCCTTATATCAAATGCCAATTTCCCAGGTTCAAAATAACATGCAAAGCCATGGCAGTAAAACTGCAATTGGAGTTAGGTCTCCAAATTCTTTACAATATGGCCTAAATCAAAATATGTCTAGTTCTGATATGTCTGACCGAGGAAGGAAGAAACTTGTTATTAAGGAGAAGACAATGCCAGGAATTAATAATGACATGCATCGGTTCTCAAATTCAGTGAAGGCCAATGTTCAAGTATCTGGAAAAAATAGAAGCTTGAACGGCTTGAATCAGCGTCCTGCTGATTTAAACCCAGTGAAGAAGATGATGAGCTCTTCTAAACATCTTACCAGGCCTGACAACATGATAGCAGAGAAACATGTGCCTAAAGAGACTGAAAAGCAAGAAAATGGAGGTGATAGAAAGCATGATAAGTTGAAACGTAAGGTGAATGCTGACCAATATAAATTGGGAACTCCCAAGAAATCAAAAACTGAAAATGTTTTCTCTGCTAATATGCAATCAAATCATGACATGGACCTTGAGAAGGCGTCTCTATATTCAAGAAATGGCTTGTCAACAAAAGCTGGTGGGAAGGATATGAGGAAGTATGATGAATATTGTTTATCTGAGGATGTATCTGATAGATTACCAGTCACTGTTAAGAAAGAGGGAGTTCAGGTGGTCTCATCGGGTTTAATGAAGAAAAGGAAATTGAAGGATCGGCTTGATGATGAAAAGCAGTATGGTGAAGAGGGTAATGCAATAGAATTTAGCAAGGAAAAGAAATACAGAATTTTGATGTCCGTAACTGAAGGTGACAATAAATTAAGCAAGGGTGGGATAAGGCAAGTCTGTGTGGCAGGCAATGGGGCCCATATGGCTGTTGGCACAGAAGTCAGTCTTGGTGATAAAGGCAACCAACTAAGGAAGCATAGGAAAAATGTTGCATCTCTTCATGCTTCAGATGGTATTGATCAATTGCGCAAGGATTTGGACTCTAGACCACATTCATTGGCAGCAACTTCAAGCTCTTCTAAAGTCTCAGGTTCTCATAAAGCTAAAACCAAGCTTGAAGATGGAAGAAGTTCACCTGTTGAATCTGTTACATCGTCACCTTTGAGGGCCTTAAACTTGGATAAGAATAATTTTGCAGCAGGAGACGCTTCAGTGAAAGACAATGTTACAAAAGGTGGCCACTCTACGGTAGGTTCCAAGAGAAATGGGGATAGCAGGGAGAGAAAGCTGTCAGTAAAATTGAAGGAGGGTAGAATTCTGCATGATTTACATCCTACATCCCACAAATTATCTTCTGTAGAGTACCAGGTTGAGGATGCTAAAGACACATCCAGGCTCCAAGCTAAAAAACCTTCTGAACTAAAGAATAATCATTTGCTTGAAGGTGGTATTCATGTTGAACAACCTGGCTATTGTGCTAATGGTGTACATAACGAGGAGAAAGTAAAGAAGGAAAACCAGGAAAGTGAACTTTCTTGGCAGAAATCTGGTAAGATTACATCATTGAACAGCAAGGAGAAAGGCAGAAATTTTGGTTCTCATGTTTGTACTGATAACATGAAGATGTCAGTTTCAGAGGCTGTTGGTTATTCAAAAAAAGGAGGGAGGTATGATTCAGCAGTTGATCCCAGTAACCATGCATCTGATGCTGAGACAAAAAATGTTGTTAAATATACTTTACCCAAGCCTAAAAGAGAAATTGACAGTAGTAGTCAGAAAAGTGCTTTAAGACATGGCCCAAAAGAAACTGGAAAGCAAACTGAGATAAAACCAAGAGACTTTGAGAAATCAGTTCCAAAGATGGATGTTCAATGTAGCAATGAGAGAAAGACTATCTCCCACCAAAACTCGACTAATGATTTTGAGCAAGAAAACAAAGCTAATCATGTAATCACAGAATCAAGAGTTGGGAAATCGAAAGTTCTCTCATCTGCAACTGGTGAAGTAAAAAGGGAAGCATTGAGTATGGGTTCTAGAACTGTACCTCAGTATCAAAAGGGAGGCATGGCTAATGAGCATCCTGTCAATGTTTCTGACAATGGTGATTTGGTCAAGTCAATGAGAAGTTTTGCTGATATTAGTAATAATGCTGGAGTTAATTGTGGTTCTGGAAATTCCGTGCCTGATCAGCAACCCACTGTGTCAAGTCCTATGAGAGAAAATTTTAACCAAACTACTGTTGACACCCTGGAAGAAGCCACAAAACTAAAAGATAGAGCAGATAATTATAAGAACTCTGGGTTTGACTTTGAAAGCAATGAGACATACTTTCAAGCTGGGTTGAAGTTTCTGCATGGAGCATCCATTTTAGAAAATTGTCACAATGAGAGTAGCAAACTTGGGGAAATTAGTCAAATGCAAATTTTTGCTACTGCTGCCAAACTTTTCAAATGCTGTGCCCATGAATATGAAGCTCGCCAAGAAATGGCTGCTGCTGCTTTGGCATATAAATGCATGGAGGTGGCATACATGAGAGTGGTCTACTGTAAGAATTCCAGTACTAACAGAGATCGACAAGAGTTACAATCAACTCTTCACATGGCTTCTCAAGGTGAATCTCCTTCATCTTCTGCATCCGATGTTGATAACCTTAACAATCAGGCAGCAGCAGATAGGGCTACTTTGCCTAGGGGTACCAATAGTCATATTGCTATCAACCAAGTCATATCTGCTCGAACTCGTCCAAATTTAATCAGGCTTCTTGATTTTACTAAGGACATACATTTTGCAATGGAGGCTTCTAGCAAATGTCAGAGCACTTTTGCGGCTGCTAATGCCATCATGGAAGAAGCAAGGAATAAGGAGTGTATAGCTTCTATTCGGAGTGTTGTTGATTTCAGCTTCCAGGATGTGGATGAGCTTGTACGTCTTGTTTGGACAGCAACAAAAGCCATAAGTCGCTCTGGTCTTGGTGGTGCTAGAGATTAA 4953 0.3994 MKEDTELEEGEAFYYKDDDDEDNIDPDSFSYIDEKIQHVLGHLQKEFEGGVSAENLGAKFGGYGSFLPTQERSPCLWSHPRTPQRNHRSPKLNNNPHMEAVFHNQKAPTNVPHPSRPENASHSSHPFRDLREALVNDSVKKEHGNSSSDIPERCTLKDDTTKNTANSTDQRTLKFRIKMKSNILSQKNAEIYSGLGLDDSPSSSMDNSPAESEGTQPVSQESAENSPTGIIQVMSYFPIPGGVLISPLHKSVLNLIKNDNKAIGDTKVSSSLNGHQDPCSMSTDESDSFVGTGHLKKNTVRIVKQSEKQLELKHPNGTFSEKDITLHKKKKLGNRTPDCKDFLPNELKWTPPSSSICDAGETAEVTAKASEASKEVNGNGVLGRMVSEEALKEESLESISGQDFGKTAMQNVGNGFLKNALEHKLESSRKDNSTDPMNNNTSNTFIRFNKVEREALKCKADHKSETHQKIKAVSERKKKSKGDQSPEKAGAVARKKSFGGTDNAMAIEKGSAGYDNTCSSKIKSSSLDKKFSGNRDSMKEKRSERKVDSLAGNGRMKNAKISNGKQSAFGIKVNERMSGHKVINQVLAGPCINDTSASIPIAGNNLAPEMISSAVAAPQLIAEDWVCCDSCQTWRLLPTGTKPDHLPEKWLCSMLDWLPGMNSCKFSEDETTKALYALYQMPISQVQNNMQSHGSKTAIGVRSPNSLQYGLNQNMSSSDMSDRGRKKLVIKEKTMPGINNDMHRFSNSVKANVQVSGKNRSLNGLNQRPADLNPVKKMMSSSKHLTRPDNMIAEKHVPKETEKQENGGDRKHDKLKRKVNADQYKLGTPKKSKTENVFSANMQSNHDMDLEKASLYSRNGLSTKAGGKDMRKYDEYCLSEDVSDRLPVTVKKEGVQVVSSGLMKKRKLKDRLDDEKQYGEEGNAIEFSKEKKYRILMSVTEGDNKLSKGGIRQVCVAGNGAHMAVGTEVSLGDKGNQLRKHRKNVASLHASDGIDQLRKDLDSRPHSLAATSSSSKVSGSHKAKTKLEDGRSSPVESVTSSPLRALNLDKNNFAAGDASVKDNVTKGGHSTVGSKRNGDSRERKLSVKLKEGRILHDLHPTSHKLSSVEYQVEDAKDTSRLQAKKPSELKNNHLLEGGIHVEQPGYCANGVHNEEKVKKENQESELSWQKSGKITSLNSKEKGRNFGSHVCTDNMKMSVSEAVGYSKKGGRYDSAVDPSNHASDAETKNVVKYTLPKPKREIDSSSQKSALRHGPKETGKQTEIKPRDFEKSVPKMDVQCSNERKTISHQNSTNDFEQENKANHVITESRVGKSKVLSSATGEVKREALSMGSRTVPQYQKGGMANEHPVNVSDNGDLVKSMRSFADISNNAGVNCGSGNSVPDQQPTVSSPMRENFNQTTVDTLEEATKLKDRADNYKNSGFDFESNETYFQAGLKFLHGASILENCHNESSKLGEISQMQIFATAAKLFKCCAHEYEARQEMAAAALAYKCMEVAYMRVVYCKNSSTNRDRQELQSTLHMASQGESPSSSASDVDNLNNQAAADRATLPRGTNSHIAINQVISARTRPNLIRLLDFTKDIHFAMEASSKCQSTFAAANAIMEEARNKECIASIRSVVDFSFQDVDELVRLVWTATKAISRSGLGGARD* 1651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 75 93 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 75 127 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 1006 1020 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 197 225 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 139 167 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 1059 1083 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 459 496 - -
Pvu9g2544 1650 PANTHER CW-TYPE ZINC FINGER 1 1645 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 528 551 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 1233 1247 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 1160 1181 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 779 818 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 1004 1043 - -
Pvu9g2544 1650 Gene3D - 620 674 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 139 159 - -
Pvu9g2544 1650 ProSiteProfiles Zinc finger CW-type profile. 619 672 IPR011124 GO:0008270
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 1167 1181 - -
Pvu9g2544 1650 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1645 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 194 225 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 268 292 - -
Pvu9g2544 1650 Pfam CW-type Zinc Finger 625 670 IPR011124 GO:0008270
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 1253 1277 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 459 490 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 1213 1277 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 788 818 - -
Pvu9g2544 1650 MobiDBLite consensus disorder prediction 524 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2544 Pvu-Chr9 35963189 35972020 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2544 - - vra:106762170 2753.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1072 3 25377775 25386584 Pvu9g2544 9 35963189 35972020 PCT