Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1072 ATGCAACGCAATAGTACTACTGAGTTGGAGGAAGGAGAGGCTTTCTATTGTTATAAGGATGAGGACGATGACAACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAGCGTATTCTGGGTGATTTTCGAAAGGATTTTGAAGGAGGCATTTTTCCTGAGCGTTTGGGTGCAAAATATGGTGACTATGGCTCCTTTTTACCCACCTATGAACGCTCGCCCCGATTGCGATTTTGTCCAAAGGCTCCAGAAAAACCCCATAGTTCACACAAATTTCCCAGCAATATCCACACCGCGGCTGCAATTTATAACTCAAAAGCACCTTCAAATACGCCTGCTTCCCCTAATGTTCTTCCATCTCAACATACAAGAGTACCTTCAGAGAAGAACACAGGCATTTCCTCGAATAGAATAACAGGGAAGTTCAGTTTGAAAGAGGACTGTGCAAATAAGTCAGGAAAGCTGACTGACCAAAGAAAGGGGATGTTGCAAATCAAAATGAAATCAAATAGCTTAGCAAAAAAGAATGCTGCAATTTACAGTGGACTTGGACTTGATGACTCTCCATCCTCCTCATCAGAAAACAGCCAAAAGGAAAGTGAAGATATGCCACATGTATCTCAAGAGATGCCTGAAGAATCTTCCACTAGCATTGTTCAGGTTATGACTTCTTTCACTATCCCTGGAGGTGTGCTAATATCACCTCTACATGACAGTCTACTCTACTTGATTAGAAAGGGAAAAACCCTTGGAGTCAGCAGGCCCATGTACTCTCGAAATGGTCATCAGGAGCATTATTCCATGTCTACTGATGAATCAGATTCTTTGGTTGGGGATTCACATTTGTTGAAGAAAAGGAAAGTGACAGTGGTAGACCAAAATGAAAAGCATCATACGAATGGTAACTTTTCTGAGAATGACATGACATTTCATACGAAGAAAAGATTAGGAAATAAAACTCCAGATTGTAAGGACTTTCTGTCTAATGATCTGAGATGCACACCATTGTCAAGCTCAATTTGTGATGCTGGTGAAACAGCTGAAGTCACTGGTAAGGCTATTGAAGTATCCAAGGAGATCAATGAAAATGGTGTGAAATGTAGAATGGATTCCACTGAAGCTTTGAAGGAGGTTTCATTGGAGTCAATATCTGATCAGGATTTTGGCAAGATTGAGAAACGAAATACAGGAAGTAGCTTTGTGAAAAAAGTTTTAGAGCATAAAATGGAAATGTCTCAGGATAACAATTCTGCTGATCCTAAGAATAATAGAAAGTGTAACACTTCTGCAATTTCGAAAAGGTTTAAGTCTGATGAAATGAAATGTGAGGTGGATCAAGATACTCAAAAGTGTGAGACTAATCAGACCAAGGTAAAATCTGAAAGCAAGAACAAGTTAAAAGGTGAACAGGAACCTGGAAAAGTTGTGACCGATGCTGAAAAAGATATCATTGGTTCTAGTAATAAAGCAATGGTGAATGATAGAAAGAGTACTAGCATTGGTGTTACTTCTTCTAAAATTAAAACGCATAAAAAGAAACTGAAGGATAATAAGGTGAGAGATTGTGACAGAGGTTCACTGAAAAAGAAAAAATTACAACTGAAGGTTGATGGAATAGATCCAACTGATGGGCCTCCCCTTAATCAGGCTCCAGTAAATGCTAACCTTGACCATGTTGAAAAGAGTGCAAATAGGGTTAAAGTAAAGGAAAAACCAAGTGTCAATAAAGTGGTTAATCAGTCGTCAGCTGTGCCATGGGTAAAAGATGCTCCAGGTGCATTTCCTGTTGCTGAAAATAAACCAACTTCTGAGATGGTTCTGTCATCATCAGCAGCAGCACCTCAACTTATTGAAGAAGATTGGGTTTGCTGTGACAGTTGCCAGAAATGGCGGCTTCTACCTATGGGTTTAAAGCCAGAGCATCTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCGGTGTAACATCAGCGAGGAGGAGACAACAAAAGCACTTTATGCTTTATATCAAATGCCGATTTCGGAGGGTCAAAATAAAATGAAAAGCCATGCCACTGGACCTGAACATGGAGTGAGATCTGTTGATGCTTTACAACTTTGCCATATTAACAAAAGATCCAGTTCTGATGCAGTGCTTGATCGAGGAAGGAAGAAACGTGGTATTAATGAAAAGGCAAAGCCAGGAATCAATAACGACAGGCATCAGTTGTCAAATACAGTAAAGAATGCTCAAGAGTCAAATCTTAAAAATAGAAGCTTGAATGGCACGAATGAGTGGTCTGCAGACTCAAACCGTATGAAGAAATCTAATTCTCAAAATTTGAGCAGGTTGAACAATTTGACAGAAGAGAAAAACACGCCTAAGGCAAAAGAATATCAAATTAATGGAGGTGACAGACATGTTAGAATGAAACGTAAGATTGAGGATAATCAACATGGATCTGGAACTCCAAAGAAATCTAAGATTGAAGTTGTTTGCTATGCTGATAAACATCTGAAACATGGTATGGAATTTAAAAAGCTGGGTCTAAACTCAAGAAATGACTTACCAACAAAAGCTAGTGGGGAAAATCCGATGAAATATGATGATTATTGTTGGTCTGACGATAACAAGTTTGCAGTTCCAGTAAAGAAGGGAGATTGGGCACAGTTTTCATCAGATGATGGTTCGTTGGATGCTACAAACAGTAGGCAAAGTGGTTCGACTAAGAAAAGGAAAACGAATGACTGGCGGGATAATGAGAAACATAACAAAACATTGTTCTTGGAAGGTGACATGCAACGTGTTAAAGACGGCAATGTAAATAGGAAAGAGAAGAAGTGTACAGTTTTGAATACAGAGGCAAAACCAGTAACTGAAAGTGATGATGAATTTATTAAAGAAAGTGGGATGAAGCGAGTTTTCTTGCCAGACAGCAGGGACAAAATGGCTATTGGGACAGAGGTGAAAAGTGATTTTAATAAGGCCCACCAGCCTAGAAAGCACAAAAAAGATTGTTATGATCCATCGGGTGGGGATTTAGGCTCTGGACAATTTTCATTGGCAGCAACTTCAAGTTCTTCTAAGGTTTCTGGGTCTCACAAAGCTAGAACTAACCTTGGAAATGCCATTGGCTCACCAGTAGAATCTGTTACCTCATCACCTTTGAGGACTTCCAACATGGAGAAATGTATTTTGGCTGCAGGGGTTGACAAATCAGAAAAAGATGATGCTAGAAAAGGAGGTTTATCAATAAAAAATTTAGATAGTAGGGAGAAAAAGTTATCGGTAAAAAAGAAGGAGAGAGTTTCACATGACATACATCTTTCACGTGTTAATTGTGGAAGTGGTTCACATCATGAGGAGAAAATGAACAAGAGTAATCAGGAAAATGCCCTTTCTTGGCAGAAATCGGGCAGGCTTACATCATTACGGGTTAAGGAAAAGGTTAGAATTTCTGGTTCTGAGGGGAGTAGGGATAAGATGAAGGCTTCAGTATCAGATAATGATTTTTCCAGAAATGGTGTGAGTTATGAGTCAGCAGTTAATCTTAATAATCACACTTCTGATACCGAGACAAGACATGATGTTAAGTACAGCTTTCTGAAGTCTGAACACAAGATTGACAACCCTAGTAAGCAAAATTCTTCAAGACATTGGTCAGATGAAACTGGAAAACAAACTGAGCTGAAACAAAAGGATTTTGGGAATCCAATTCTGAAAAGGGAAACATTATATTTGGGTTCTAGAACTTCACCCAAGTCGCAAAAAGGAGATATGTCCAATGGGCATCCTGTCCATGCATCTAGCAATGGTGATGTTCCTAGGCTTGTGAGGAAGGCAGTTGATATTACTCGCAAGGTTGGAGTTGATCACAGTTCAGGAAGTTTAGTATCTGACAGACAGCTCAGTGGGTCAAGTCCCTTGACAACAAATTCTAGCCAAACTGCCTCTAGCATTCTGGAAGAAGCCACAAAGCTAAAGGATTCTGCAGATCATTATAAGATCTCTGGTTTTGAGTTTGAAAGTAACGAGACTTATTTTAAAGCTGCCTTGAAGTTTCTGCGTGGAGCATCACTTATAGAAAAATCCCACAGTGAAATTAGCAAGCAAGGAGAGATGAATCAAATGCAAATTTATGCTGCTACAGCTAAACTTTTTGAATCCTGTGCTCATAAATATGAAAGACACCAAGAAATGGCTGCTGCTGCCTTGGCCTATAAATGCATGGAGGTGGTATACATGAGATTGGTTTATAATAAGCATTCTAGCATAAACAGGGATCGTGATGAGTTAAAATCAATTCTACACGTGGTTTCTCAAGGTGAATCTCCTTCGTCATCTGCATCTGATATTGATAATTTAAATAACCTGGCGGCAGTGGATAGGTCAAATTTGACAAGGGGTTATAATACTCTTGTTGCTAACAATCAAGTCATATCTGCTCAGAATCGCCCAAATATTGTCAGGCTCCTTGACTTTACTCAAGACATAAATTTTGCAATGGAGGCTTCAAGAAAATGCAAGAGCACTTTCATGGCTGCTAATTTGAACATGGATGAAGCACGGAATAGGGATTGCATAACTTCGATTAGGAAGGTTGTTGATTTCAGCTTCCAAGATGTAGAAGAGCTTGTACATCTGGTGTTGATTGCAACAAAAGCAATAACTCGAGCTGGTCTTGGTGGTGTTAGAGATTAA 4704 0.3937 MQRNSTTELEEGEAFYCYKDEDDDNIDLDSLSYIDERIQRILGDFRKDFEGGIFPERLGAKYGDYGSFLPTYERSPRLRFCPKAPEKPHSSHKFPSNIHTAAAIYNSKAPSNTPASPNVLPSQHTRVPSEKNTGISSNRITGKFSLKEDCANKSGKLTDQRKGMLQIKMKSNSLAKKNAAIYSGLGLDDSPSSSSENSQKESEDMPHVSQEMPEESSTSIVQVMTSFTIPGGVLISPLHDSLLYLIRKGKTLGVSRPMYSRNGHQEHYSMSTDESDSLVGDSHLLKKRKVTVVDQNEKHHTNGNFSENDMTFHTKKRLGNKTPDCKDFLSNDLRCTPLSSSICDAGETAEVTGKAIEVSKEINENGVKCRMDSTEALKEVSLESISDQDFGKIEKRNTGSSFVKKVLEHKMEMSQDNNSADPKNNRKCNTSAISKRFKSDEMKCEVDQDTQKCETNQTKVKSESKNKLKGEQEPGKVVTDAEKDIIGSSNKAMVNDRKSTSIGVTSSKIKTHKKKLKDNKVRDCDRGSLKKKKLQLKVDGIDPTDGPPLNQAPVNANLDHVEKSANRVKVKEKPSVNKVVNQSSAVPWVKDAPGAFPVAENKPTSEMVLSSSAAAPQLIEEDWVCCDSCQKWRLLPMGLKPEHLPEKWLCSMLYWLPGMNRCNISEEETTKALYALYQMPISEGQNKMKSHATGPEHGVRSVDALQLCHINKRSSSDAVLDRGRKKRGINEKAKPGINNDRHQLSNTVKNAQESNLKNRSLNGTNEWSADSNRMKKSNSQNLSRLNNLTEEKNTPKAKEYQINGGDRHVRMKRKIEDNQHGSGTPKKSKIEVVCYADKHLKHGMEFKKLGLNSRNDLPTKASGENPMKYDDYCWSDDNKFAVPVKKGDWAQFSSDDGSLDATNSRQSGSTKKRKTNDWRDNEKHNKTLFLEGDMQRVKDGNVNRKEKKCTVLNTEAKPVTESDDEFIKESGMKRVFLPDSRDKMAIGTEVKSDFNKAHQPRKHKKDCYDPSGGDLGSGQFSLAATSSSSKVSGSHKARTNLGNAIGSPVESVTSSPLRTSNMEKCILAAGVDKSEKDDARKGGLSIKNLDSREKKLSVKKKERVSHDIHLSRVNCGSGSHHEEKMNKSNQENALSWQKSGRLTSLRVKEKVRISGSEGSRDKMKASVSDNDFSRNGVSYESAVNLNNHTSDTETRHDVKYSFLKSEHKIDNPSKQNSSRHWSDETGKQTELKQKDFGNPILKRETLYLGSRTSPKSQKGDMSNGHPVHASSNGDVPRLVRKAVDITRKVGVDHSSGSLVSDRQLSGSSPLTTNSSQTASSILEEATKLKDSADHYKISGFEFESNETYFKAALKFLRGASLIEKSHSEISKQGEMNQMQIYAATAKLFESCAHKYERHQEMAAAALAYKCMEVVYMRLVYNKHSSINRDRDELKSILHVVSQGESPSSSASDIDNLNNLAAVDRSNLTRGYNTLVANNQVISAQNRPNIVRLLDFTQDINFAMEASRKCKSTFMAANLNMDEARNRDCITSIRKVVDFSFQDVEELVHLVLIATKAITRAGLGGVRD* 1568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 110 137 - -
Pvu3g1072 1567 ProSiteProfiles Zinc finger CW-type profile. 617 670 IPR011124 GO:0008270
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1249 1269 - -
Pvu3g1072 1567 PANTHER CW-TYPE ZINC FINGER 1 1561 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 758 790 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 184 219 - -
Pvu3g1072 1567 PANTHER CW-TYPE ZINC-FINGER PROTEIN 1 1561 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1149 1175 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1026 1057 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 716 742 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 895 909 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1205 1276 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1149 1168 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 758 792 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1220 1239 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 455 476 - -
Pvu3g1072 1567 Pfam CW-type Zinc Finger 623 668 IPR011124 GO:0008270
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1115 1136 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 716 738 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 891 923 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1296 1318 - -
Pvu3g1072 1567 Gene3D - 613 672 - -
Pvu3g1072 1567 MobiDBLite consensus disorder prediction 1293 1318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1072 Pvu-Chr3 25377775 25386584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1072 - - gmx:100793863 2154.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1072 3 25377775 25386584 Pvu3g1072 3 25377775 25386584 ECH
Pvu3g1072 3 25377775 25386584 Pvu9g2544 9 35963189 35972020 PCT