Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2486 ATGACAATGCAAATCTCAAGTAAAAAGTTCGATCGAGCACCAAGCATTCGACAGCTGTTTCCACCAAAAAATCCTGAGGAAAGTAATGGATGTGTCATATGCTCTGGTCAGTCCTTCAATCATCAATGTAACACGCAAGAAACCAGAACCCATCAATGCTATGGTTCAAAACCACTTCTGTTAAAAGATGTGGCTCCTAGCCCCAGAAATTCCATATCTTCTGTTTCCAATGCCCTTGAACATACTGTACCTATGCATCAACTAGTTGATCGCTCAGCTACTTCACCAATTTCATCTCATCAAGTTGATTACCAATTGGATATTGACCACATTTGTTCTTCGGAAGCCCCCTCAAGTTCATTTCCTGCCTTTCGAGATAAAATGCCAATGAGTCTTCGGATGTATTTGCCCTTATATAGAGCTGCTTTGAAAGGAGACTGGGAGAAGGCCAATGAGTTCCTAAATTTGCATCCTGGTGCGGAGAATGCCAGGATTTCAAGAGGGTGGGAAACAGCTCTTCATATTTCAGCCGGGGCTCGAGGCACCAAATTTGTGGAGGAACTTGTCAAAAGAATGGAAACTAGAGACTTGGAAATTCAAAATAAAGATAAGAACACTGCACTTTGTTTTGCTGCTGCGTCTGGGGTTACCAAGATAGCTAAGCTAATGGTGGAAAGGAATGGAAACTTACCTAGAATACGAGGTAGTGAAGGGGTGACACCACTTTATATAGCTACATTGCTGGGCCAAAGGGACATGGTTTGGTATCTCTATTCAGTGACCGATAAAGAGATTCTAAAAACAGAAGACTATTTTAGTCTACTAATTGCTGCTATATCCACAGATTTATATGATTTTGCCTTACATGTTCTGGAGTGTCGACCACAATTAGCAACTTATCATGGCTTGAATGGGGAGACAGCTTTACATGTGTTGGCAAAAAAGACTTCATCATTTAGGAGTGGCACTCAACTGGGCATCTGGGAAAGATGCATCTATCCATGGATCCAAGTCAAACTAGCAACTGAGTACAAATGCCAGTCAAACAACTCGCTATCCCAGGCTCCTTCAACTTTTCAAGACCTATTGGTGAATGGACTCTGTCGTGCTGTAAAATATCTTGTGCCAGGATTTGAAACCGTTCAGAAGAAAAAGATATTGAACTCTCAGGCTTTAAAGTTAGTGCAACATCTTTGGGAACTAGTAGAGTCATCAGACGAAATGCACTATGGAGACTTAATTAAAAGCCCTTTGTCACGGCCCCTATTTATTGCTGCTGAATTTGGAATACCTGAGATTGTAACTGAGCTTCTTTACTCATATCCCGATCTACTTTGGAAAGTTGACAGCCAAAATAGAAGTCTTTTTCACATTGCAATCATGTATCGCCAGGAAAAAATATTTAACCTGATTTATAACATAGGGGCACATAAGGATCTGATAACTTCTTATAGAGACAATAACAATCACAACATACTGCATTTGGCTGGAAAATTGGCACCTTCAGATCAACTTCATGTTGTATCTGGTGCAGCACTGCAGATGCAAAGGGAATTATTGTGGTTCAAGGAGGTGGAAAAGATCATACAGCCTCTATTGAAGGAGATTAAGGATTCTGAAGGTAGAACGCCTCAAATGCTATTTACCGAGGAACACAAGGGGTTGGCCAAAGAAGGAGAAAAATGGCTGAAGAACACTGCGTCATCATGCATGCTAGTTTCAACTCTTATTACCACTGTGATGTTTGCAGCATTATTTACGGTACCAGGTGGGAACAACAACAGTAATGGATATCCTATTTTTATGCGCACTACATCCTTCAAAGTTTTTGCTCTCTCAGATGCTCTTGGATTATTCTCCTCAGTAGTATCTATATTGATGTTTTTGTCAATACTCACCTCAAGGTATGCACAGGAGGATTTCCTTGTGTCACTGCCAAAAAGGTTGAGTGTTGGCATTGCGACCCTTTTCTTCTCCATCATTACAATGCTCATAGCTTTTGGTGCAACCTTTTTCATCGTACTTGGCCATCAATTGGCATGGATTGTCATTCCAATAACCCTTGTTGCATGTATCCCAGCAATATTGTTTGCCTTTTTACAGTTTCCTCTTCTTGTTGATACAATCTCTTGTACATATGGAGCTGGTGTATTTGCTCGTTGA 2163 0.4078 MTMQISSKKFDRAPSIRQLFPPKNPEESNGCVICSGQSFNHQCNTQETRTHQCYGSKPLLLKDVAPSPRNSISSVSNALEHTVPMHQLVDRSATSPISSHQVDYQLDIDHICSSEAPSSSFPAFRDKMPMSLRMYLPLYRAALKGDWEKANEFLNLHPGAENARISRGWETALHISAGARGTKFVEELVKRMETRDLEIQNKDKNTALCFAAASGVTKIAKLMVERNGNLPRIRGSEGVTPLYIATLLGQRDMVWYLYSVTDKEILKTEDYFSLLIAAISTDLYDFALHVLECRPQLATYHGLNGETALHVLAKKTSSFRSGTQLGIWERCIYPWIQVKLATEYKCQSNNSLSQAPSTFQDLLVNGLCRAVKYLVPGFETVQKKKILNSQALKLVQHLWELVESSDEMHYGDLIKSPLSRPLFIAAEFGIPEIVTELLYSYPDLLWKVDSQNRSLFHIAIMYRQEKIFNLIYNIGAHKDLITSYRDNNNHNILHLAGKLAPSDQLHVVSGAALQMQRELLWFKEVEKIIQPLLKEIKDSEGRTPQMLFTEEHKGLAKEGEKWLKNTASSCMLVSTLITTVMFAALFTVPGGNNNSNGYPIFMRTTSFKVFALSDALGLFSSVVSILMFLSILTSRYAQEDFLVSLPKRLSVGIATLFFSIITMLIAFGATFFIVLGHQLAWIVIPITLVACIPAILFAFLQFPLLVDTISCTYGAGVFAR* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2486 720 Pfam Ankyrin repeats (3 copies) 173 258 IPR002110 GO:0005515
Pvu9g2486 720 SUPERFAMILY Ankyrin repeat 137 497 IPR036770 -
Pvu9g2486 720 PANTHER CASKIN 80 714 - -
Pvu9g2486 720 PANTHER ANKYRIN REPEAT PROTEIN 80 714 - -
Pvu9g2486 720 Gene3D - 385 557 IPR036770 -
Pvu9g2486 720 Gene3D - 133 325 IPR036770 -
Pvu9g2486 720 Pfam Domain of unknown function 560 673 IPR026961 -
Pvu9g2486 720 MobiDBLite consensus disorder prediction 1 22 - -
Pvu9g2486 720 SMART ANK_2a 168 199 IPR002110 GO:0005515
Pvu9g2486 720 SMART ANK_2a 203 232 IPR002110 GO:0005515
Pvu9g2486 720 SMART ANK_2a 451 480 IPR002110 GO:0005515
Pvu9g2486 720 SMART ANK_2a 237 267 IPR002110 GO:0005515
Pvu9g2486 720 SMART ANK_2a 133 162 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2486 Pvu-Chr9 35335969 35341254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2486 412 692 Miscellaneous Gene Families AT3G12360 22.630 5.77e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2486 - - gmx:100814269 1234.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1499 3 34169955 34170663 Pvu9g2486 9 35335969 35341254 PCT
Pvu9g2486 9 35335969 35341254 Pvu3g1500 3 34194667 34198110 PCT