Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2443 ATGGGAACGTTTAACAGCTTCAGAAAAGCCTATGGTGCTCTCAAGGACTCCACCAAGGTTGGCCTTGCCAAAGTCAATAGCGAATACAAGGAGTTGGATATTGCAATTGTAAAGGCCACCAATCATGTGGAATACCCTCCCAAGGAACGTCATGTTCGAAAAATATTCTATGCAACATCAGCACACCAGCCACGAGCAGATGTCTCATACTGCATTCATAAACTTTCTAAGAGACTCTCCAAAACACGAAGCTGGATAGTTGCCATAAAGGCATTAATAGTCATTCACAGGACTTTGAGAGAGGGTGACCCTACCTTTAGAGAAGAGATTCTTAACTACTCACGCAGGGGACATATCCTCCAAATATCCAATTTCAAAGATGATTCAAGCCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTATTTTTGGAAGAAAGACTTGAATGCTTTAGAGTGCTTAAATATGATATAGAATCAGAACGTTTAACAAAAGCATCACCTGCTGCAACTAAAGCACACAGTAGAACTCGATCATTGAGTAGTGAGGACCTGTTGGGGCAGTTACCTGCTCTGCAACAACTCTTATATCGCCTTATTGGTTGTCAACCTGAAGGATGTTCTTATAGCAACTATCTAGTGCAATATGCTTTGGCCCTGGTTTTGAAAGAAAGTTTCAAAATATACTGTGCACTCAATGATGGAATCATCAATCTCGTGGATATGTTCTTCGATATGACAAGGCATGATGCAGTGAAGGCTCTAAACATTTATAAAAGAGCTGGTCAACAGGCTGAGAATCTTGCTGACTTCTATGAATATTGCAAGGGCTTGGAACTTGCTAGGAATTTCCAGTTTCCAACATTGAGACAGCCACCTCCCTCTTTCCTTGCAACTATGGAAGAATACATTAGAGAAGCACCTCAAACAGGATATGTTAACAAAAGATTGGAATATCAAGAAAATGAGGAATCATCTAAAGAAGATTCAGAATCCAGTGAAACTGAAGACCCTCAAGAAAATGAAGAACAATATGAGGAAGTCAATGAGGAAGATTCGGTAGCAGATGAAGAAGTACATTCCAAGGAGGAGGAGGAGGAGGTGGTGGTTGAGCCTCCTCCTTTGATATCAACTGATGATGGTACAAATGATTTGTTGGGACTTAATGAAATAAATCTAAAAGCTATGGAACTGGAGGAAAACAATGCTATGGCTCTTGCAATTGTACCACCTGGTGGAAGTAATCCAAACAATCTTGCTTTGAGTAACATTGATGGTGCAACTGGTTGGGAACTTTCATTAGTTACAACACGAAGTAACCATACTAGTCAAACCACAGATCGCAGAATGGCCGGTGGGTTTGATAACCTATTATTGGACAGTCTGTATGAAGATGAAAATGCCAGAAGACAACTTCAACTCCAAAATGCAGGTTATGGACATGGGGGATCCATGGATATACAGAACCCTTTTCATCATTATAACCAACAAGATCCATTTGCAATGTCCAACAACATAGCACCCCCACCCAATGTGCAAATGGCACAAATGGCTCAACAACAGCAACAACAAATGATGTTCCAACAACAACAAATGATGTACCAACAACAGCCACAACAACACAACATGATGATGGTCCCTCACCAGCAGCAACCACACAACCAATACTCTCAACAGAATGCAGGTTCTCATAATCCATTTGGGGATCCTTTGCCAGGACCAAACTATAACCAGAATTACACACCCCAACAAGGAAATTACAATTTAATGTAG 1782 0.4102 MGTFNSFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATNHVEYPPKERHVRKIFYATSAHQPRADVSYCIHKLSKRLSKTRSWIVAIKALIVIHRTLREGDPTFREEILNYSRRGHILQISNFKDDSSPQAWDCSAWVRTYALFLEERLECFRVLKYDIESERLTKASPAATKAHSRTRSLSSEDLLGQLPALQQLLYRLIGCQPEGCSYSNYLVQYALALVLKESFKIYCALNDGIINLVDMFFDMTRHDAVKALNIYKRAGQQAENLADFYEYCKGLELARNFQFPTLRQPPPSFLATMEEYIREAPQTGYVNKRLEYQENEESSKEDSESSETEDPQENEEQYEEVNEEDSVADEEVHSKEEEEEVVVEPPPLISTDDGTNDLLGLNEINLKAMELEENNAMALAIVPPGGSNPNNLALSNIDGATGWELSLVTTRSNHTSQTTDRRMAGGFDNLLLDSLYEDENARRQLQLQNAGYGHGGSMDIQNPFHHYNQQDPFAMSNNIAPPPNVQMAQMAQQQQQQMMFQQQQMMYQQQPQQHNMMMVPHQQQPHNQYSQQNAGSHNPFGDPLPGPNYNQNYTPQQGNYNLM* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2443 593 MobiDBLite consensus disorder prediction 550 568 - -
Pvu9g2443 593 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 580 - -
Pvu9g2443 593 SUPERFAMILY GAT-like domain 178 309 - -
Pvu9g2443 593 MobiDBLite consensus disorder prediction 575 593 - -
Pvu9g2443 593 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Pvu9g2443 593 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Pvu9g2443 593 SMART enth_2 30 161 IPR013809 -
Pvu9g2443 593 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 580 IPR045192 GO:0048268|GO:0072583
Pvu9g2443 593 Gene3D ANTH domain 174 326 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu9g2443 593 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Pvu9g2443 593 Gene3D - 6 161 IPR008942 -
Pvu9g2443 593 MobiDBLite consensus disorder prediction 550 593 - -
Pvu9g2443 593 MobiDBLite consensus disorder prediction 327 367 - -
Pvu9g2443 593 MobiDBLite consensus disorder prediction 322 386 - -
Pvu9g2443 593 CDD ANTH_N 32 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2443 Pvu-Chr9 34815589 34821759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2443 K20044 - gmx:100786060 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2443 9 34815589 34821759 Pvu9g2443 9 34815589 34821759 ECH
Pvu3g1468 3 33532578 33538307 Pvu9g2443 9 34815589 34821759 PCT