Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1468 ATGGGAACGTTCCGGAGCTTAAGAAAGGCCTACGGTGCTCTCAAAGACTCTACCAAGGTTGGCCTAGCCAAGGTCAATAGCGAATACAAGGATTTGGATATTGCTATTGTGAAGGCTACCAGTCACGTAGAATATCCTCCAAAAGAACGTCATGTTAGAAAGATATTCTATGCAACTTCAGCACACCAACCACGGGCAGATGTGGCTTACTGCATACACACACTTGCTAGGAGGCTTGCAAAGACCCGGAATTGGATTGTTGCAGTAAAGACATTGATTGTTATTCATAGAATACTGAGAGAGGGTGATCCTACTTTCAAAGAAGACCTCATAAACTATGCGCGCAGGGGACGTTTTCTTCAAATATCCAATTTCAAAGATGACTCGAGTCCTCAAGCTTGGGACTGTTCTGCATGGGTTCGAACCTATGCACTATTCTTAGAAGAAAGGCTTGAATGTTTTAGAATCCTTAAATATGACATCGAGTCTGAGCGTTTAACAAAACCATCACCGGTTATAACCAAGGGACACAGCAGAACACGGTCGTTGACTAGTGAAGGGCTATTGGAGCAGCTGCCTGCGCTGCAGCAACTTCTATACCGCTTAGTTGGTTGTCAGCCTGAAGGTTTGGCTCTCAGCAATTATCTAATACAGTATGCACTGGCATTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCCCTGAATGATGGAATTATAAATCTTGTGGATGTGTTCTTTGATATGCCAAGATATGATGCAATCAAGGCGTTACATATTTATAAAAGAGCTAGCCAACAGGCTGATAATCTTGCTGAATTCTATGAATACTGCAAGAGATTGGACCTTGCTAGGAATTTTCAATTTCCAATCTTGAGACAGCCACCTGGTTCTTTTCTTGCCACGATGGAAGAATACGTTAGAGAAGCACCCTTGAATGCATCTAATAGACTGGAATATCACGAAAATGATCAATCACCTAAAAAGGAAGCAGAACCCAAAGAACCCGAAGAGGCTCAAGCAAATGAAAAACCAGATGAAGAAGACAAAGAGGAAGAACTGGTCGATAAAGATGAAGCAGAGCCCCAGAAGGAGGAAGTGGAACTTCCTCCTTTGATATCAACTGATTCTACTGATGATTTGCTGGGTCTAAACGAAATAAATCCAAAAGCCCAGGAACTAGAAGAAAGCAATGCTTTGGCGCTAGCAATTGTTCCACCCGGAGGAAATAACTCAAGCAATCTTGCTTTGGCTAACATAAATGGAACTTCTGGTTGGGAACTTGCACTGGTTACAACACCAAGTACCCATACAAGCCAAGCGCCAGTTCGCAAAATGGCTGGTGGGTTTGACAATCTATTACTAGACAGTTTGTATGAAGATGAAAATGCTAGGAGACAACTTCAACTCCGAAATGCGGGCTATGGATATGGGGATATGGATACACATAATCCATTCAATCATCATAATCAGCAAGATCCATTTGCAATGTCCAACAACATACCACCTCCAGCCAATGTGCAAATGGCATTCATGCCTCAGCAACAGCAACAACATAACATGATGATGGTCCCTTACCAGTACCCACAGACTCAATACCATCAACAAATGCCAGTCATGGGTTCTTCTAATCCATTTGATGATCCCTTACCCGTGCCCACCTATGCTTATAATTCCATGAATCATCAGGGAAACTACCATTTAATGTAG 1710 0.4234 MGTFRSLRKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATSHVEYPPKERHVRKIFYATSAHQPRADVAYCIHTLARRLAKTRNWIVAVKTLIVIHRILREGDPTFKEDLINYARRGRFLQISNFKDDSSPQAWDCSAWVRTYALFLEERLECFRILKYDIESERLTKPSPVITKGHSRTRSLTSEGLLEQLPALQQLLYRLVGCQPEGLALSNYLIQYALALVLKESFKIYCALNDGIINLVDVFFDMPRYDAIKALHIYKRASQQADNLAEFYEYCKRLDLARNFQFPILRQPPGSFLATMEEYVREAPLNASNRLEYHENDQSPKKEAEPKEPEEAQANEKPDEEDKEEELVDKDEAEPQKEEVELPPLISTDSTDDLLGLNEINPKAQELEESNALALAIVPPGGNNSSNLALANINGTSGWELALVTTPSTHTSQAPVRKMAGGFDNLLLDSLYEDENARRQLQLRNAGYGYGDMDTHNPFNHHNQQDPFAMSNNIPPPANVQMAFMPQQQQQHNMMMVPYQYPQTQYHQQMPVMGSSNPFDDPLPVPTYAYNSMNHQGNYHLM* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1468 569 SMART enth_2 30 161 IPR013809 -
Pvu3g1468 569 SUPERFAMILY GAT-like domain 178 309 - -
Pvu3g1468 569 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Pvu3g1468 569 MobiDBLite consensus disorder prediction 344 359 - -
Pvu3g1468 569 MobiDBLite consensus disorder prediction 314 381 - -
Pvu3g1468 569 MobiDBLite consensus disorder prediction 321 343 - -
Pvu3g1468 569 Gene3D - 6 161 IPR008942 -
Pvu3g1468 569 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Pvu3g1468 569 SUPERFAMILY ENTH/VHS domain 30 162 IPR008942 -
Pvu3g1468 569 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 556 - -
Pvu3g1468 569 CDD ANTH_N 32 154 - -
Pvu3g1468 569 Gene3D ANTH domain 174 322 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu3g1468 569 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 556 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1468 Pvu-Chr3 33532578 33538307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1468 K20044 - gmx:100818165 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1468 3 33532578 33538307 Pvu3g1468 3 33532578 33538307 ECH
Pvu3g1468 3 33532578 33538307 Pvu9g2443 9 34815589 34821759 PCT