Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2433 ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCGGAGGCTGCTTCAGTGTTGAAGCACTCTCTTGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTGGCTGCAACTTTGCTGAGCCTAAGAGCCAGTTCCTTGAGAAGGGCTTGTCTCAAATCTCAGCCACACCAAACATCACACCCTCTTCAGTGCAGAGCCCTTGAGCTCTGCTTCAATGTGGCCCTCAACAGGCTCCCAACAACACCTGCTCCCTTGCTCCACACACAGCCTTCTCTCTCCAATGCTCTCATTGCTGCACTCAAGAGAGCACAGGCTCACCAGAGAAGAGGCTGCATTGAGCAGCAGCAGCAGCAGCCACTTCTCACCATCAAGGTGGAGCTTGAACAGCTCATTATATCTATCCTTGATGACCCTAGCGTTAGCAGGGTTATGAGAGAGGCTGGTTTCTCTAGCACTGCTGTTAAGACCAACATAGAGGACACTTCTTCAACACCTTCAGTTTTCCAGTGTTACAACACTTCTGGTGGTGTTTTCTCTTCTCCTTGTTCTCCTGCTCCCAGTGAGAACAACACAGCCAGTTCCTTCAGGCAGAACCATTTCTTGGCTTCTTACACTTCTCCTGAGTTCAGTGCTCCACTTCTGTTCTCTCCACAGAAGAAGGCCTCGGTGTTTCCCATCACTGAGTCACCACCACCCTCTTCCAAGGAGGATATCAAGGTGGTTATTGATGTCCTCTTGAGGAAGAAGAAGAAGAACACTGTGATAGTAGGTGACTCAGTGGCACTCACTGAAGGCCTTGTGGGAGAGCTAATGGGGAAGTTGGAAAGAGGAGATGTGCCTGATGAGTTGAAGTCAACACATTTCATCAAGTTTCAGCTTGCACCGGTTTCTCTGAGGTTCATGAAAAGGGAAGAAGTGGAGATGAGTCTCTCAGCACTGAAGAGGAAGGTGGATTCTGTTGCATCAGGAGGAGGAGCCATTTTCTATGTTGGAGACCTCAAGTGGACTGTGGAAGCAACAACTTCTAGTGAAAAGGAGGAAGGAGAAGTTTGTGGCTATAACCCAGTTGATCATCTACTTGCTGAAATAGGGAAGTTATTTTGTGATTCCAACACCAAGGTGTGGCTTATGGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCTCCTCTTGAGACTCAGTGGGCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGTCTCCATGCTTCCAGTGTTCACGATTCAAAGATGACAATCTCCCAGAATCCATCTTATATGCTGGAAACAAAGCTCTTCAGTAACAGCAAGGAGGAGCAGGATAAACTCAACTGCTGTGAAGAATGTGCCACCAATTATGAAAAAGAAGCTCAGTTGTTCAAACCAGGCCAGAAGAAACTGTTGCCTTCCTGGCTTCAGTCTCATACCACCGAAGCCCATCAAAAGGATGAGTTGGTTCAGTTGAAAAGGAAATGGAACAGACTATGCCACTGTCTGCACCAGAGCAAACAGTCTGAAAACCATTGGAGCAACAGTTTACACGGCAATCAGAGTTCAAATGGGAAGATCTACCCTTACAACTCATCATATCCCTGGTGGCCAAACCAAGGCAGTGTCTTCACAGATTCAAGCTCAATATCTTTTGCTGATTCACCTGCCAAACCGGCTTATAGCTCCAACATTGTCCCTCGGTTTCGGCGCCAACAATCATGCACCATTGAGTTCAATTTCAGTGATGTGACTCAGAGAAAGCCATCCACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAATAACGAAGTAAAGATTACTCTTGCTCTTGGGAATTCAACATTCGGTGGTTCAGGGCAAACGGTGGAAAATATCATAACTACTGATAGAGCCCTGCGACAAGCTCATATTTGTAAGCTATTGCAGGAGAATGTGCCATGGCAATCTGAGACAGTTCCTTCCATAGCAGAGGCCTTGGTTGATTCCAAATCTGCAAAGCAAAGTGCCACTACTTGGTTGTTGTTGCAAGGAACTGACTCTATTGGGAAAACAAGGTTGGCGCGTGCCATTGCAGAATCAGTGTTTGGCTCAGTTGATGTGCTCCTTCACTTGGACATGCTGAAAAGTTCAGCAACCCCATTTGCTGAAAGGGTGGCTGGAGCATTGAAAAGCCATGAGAAGCTTGTGATTCTTGTAGAAAATTTGGATTTTGCTGATGCCCAGTTCAGGAAGTTTCTTGCAGATGGGTTTGAAACTGGAAACTTTGGAAGTTTAAGTAGGAGTGAGGAGAGTTCAGGCCGAGCAGTGTTCATATTGACCAATGGTGACACCAGGGGCAATGAAGAGCAGAACAATAAGGAGTCAGTGATGAAGTTGGTGTTGCAGATAAGTGAAACCAAGCCTGATTTGGAGTCTTCATCATCACCTTGTTTGGGTCAGAAGAGAAGAGCTGAAGTGCTGGATTTATTTTCCAAGGTTAAGAATCCAAGGGTGGAGGAGAAGGAGGAGGGTAGGAAGGTGTTTTCTCGGCATTCAAGCTTCAACAATCTTGACCTGAACATGAAAGCTGATGAAGAGGATGATGTGGAAGAGAAAACAGGTGGAAGTAGTCCAATTTCAAGTGATTTGACAAGGGAAACTGTGGTGGATCCGTTGAGCTGGAATGGGGTTCTTGACTCAATTGAGAACAGGTTTGAGTTGAATGAAAGTCCAGAGAGGGAGAGGGAAGTGGGAGAGATGTTTGTGTCAAAGATGAAAGAGTCTTTTGAGGAGGTTTATGGGAAAGAATGTGTGGTGAAATTTACTGTAGAGAAGAGGGTGATAGATGAAATTGGTGTGGGGTGTGGAAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTACAGACAGTTAACTTTGGTGGGGAAGAGGGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGTGATAGGACATGGGATAGTGGATTCATGGGTTCATGTTTGCCCAAGAATCTCAAAGTTAACTACTTCATGGATTGA 3078 0.4613 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPHQTSHPLQCRALELCFNVALNRLPTTPAPLLHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKTNIEDTSSTPSVFQCYNTSGGVFSSPCSPAPSENNTASSFRQNHFLASYTSPEFSAPLLFSPQKKASVFPITESPPPSSKEDIKVVIDVLLRKKKKNTVIVGDSVALTEGLVGELMGKLERGDVPDELKSTHFIKFQLAPVSLRFMKREEVEMSLSALKRKVDSVASGGGAIFYVGDLKWTVEATTSSEKEEGEVCGYNPVDHLLAEIGKLFCDSNTKVWLMATASYQTYMRCQMRQPPLETQWALQAVPVPSGGLGLSLHASSVHDSKMTISQNPSYMLETKLFSNSKEEQDKLNCCEECATNYEKEAQLFKPGQKKLLPSWLQSHTTEAHQKDELVQLKRKWNRLCHCLHQSKQSENHWSNSLHGNQSSNGKIYPYNSSYPWWPNQGSVFTDSSSISFADSPAKPAYSSNIVPRFRRQQSCTIEFNFSDVTQRKPSTALDSLKGMEGNNNEVKITLALGNSTFGGSGQTVENIITTDRALRQAHICKLLQENVPWQSETVPSIAEALVDSKSAKQSATTWLLLQGTDSIGKTRLARAIAESVFGSVDVLLHLDMLKSSATPFAERVAGALKSHEKLVILVENLDFADAQFRKFLADGFETGNFGSLSRSEESSGRAVFILTNGDTRGNEEQNNKESVMKLVLQISETKPDLESSSSPCLGQKRRAEVLDLFSKVKNPRVEEKEEGRKVFSRHSSFNNLDLNMKADEEDDVEEKTGGSSPISSDLTRETVVDPLSWNGVLDSIENRFELNESPEREREVGEMFVSKMKESFEEVYGKECVVKFTVEKRVIDEIGVGCGNFTNSMFEKWLKDIFQSSLQTVNFGGEEGGIGFTLCWGGKGDRTWDSGFMGSCLPKNLKVNYFMD* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2433 1025 MobiDBLite consensus disorder prediction 864 886 - -
Pvu9g2433 1025 Gene3D - 9 170 IPR036628 -
Pvu9g2433 1025 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Pvu9g2433 1025 Gene3D - 234 414 IPR027417 -
Pvu9g2433 1025 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1000 - -
Pvu9g2433 1025 Gene3D - 629 831 IPR027417 -
Pvu9g2433 1025 PANTHER PROTEIN SMAX1-LIKE 5 1 1000 - -
Pvu9g2433 1025 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Pvu9g2433 1025 Pfam Clp amino terminal domain, pathogenicity island component 131 166 IPR004176 -
Pvu9g2433 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 784 IPR027417 -
Pvu9g2433 1025 ProSiteProfiles Clp repeat (R) domain profile. 8 170 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2433 Pvu-Chr9 34680439 34684961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2433 - - gmx:102660146 1701.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2433 9 34680439 34684961 Pvu9g2433 9 34680439 34684961 ECH
Pvu3g1458 3 33372676 33376480 Pvu9g2433 9 34680439 34684961 PCT