Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1458 ATGCGCTCAGGAGTTTGTGCATTACAGCAGACCCTCACAGCTGAGGCTGCTTCAGTGTTGAAGCACTCTCTGGGGTTGGCTCGGAGGAGGGGCCATGCACAGGTCACTCCTCTGCATGTCGCTGCCACTTTGCTCAGCCTAAGAGGCAGTTCCTTGAGAAAGGCTTGTCTCAAGTCTCAACCTCACCAAAGTTCTCATCCTCTTCAATGCAGGGCTCTTGAGCTGTGCTTCAATGTGGCTCTCAACAGGCTCCCAACATCACCTGCTCCTTTGATCCACACGCAGCCCTCTCTCTCCAATGCTCTCATTGCTGCATTGAAGAGAGCTCAGGCTCACCAGAGAAGGGGCTGCATAGAGCAACAGCAACAGCAGCCTCTTCTCATCATCAAGGTTGAGCTGGAACACCTCATCACATCAATCCTTGATGACCCTAGTGTTAGCAGGGTTATGAGAGAGGCTGGTTTCTCTAGCACTGCTGTTAAGAACAACATAGAGGATTCTTCACCTCATTCTGTTTTCCAGTGTTACAATAGCTCTGGTGGTGTGTTTTCTTCTCCTTGCTCACCTTCTGCCAGTGAGAACCACAGGGAAACAACCACCAACCCTACCAATTTCAGGCAGACTCATCATTTCTTAACTTCTTATGCTTCTGAGTTCCACCCTTCACTTGTCTTTTCTCCGCTAAAGAGTTCACCAGCGTGTTCCTTCTCTGGTGCAGCTTCTTCTAGTAAGGATGATATCAGGGTTGTTCTGGATATTCTCCTGAGGAAGAAGAAAAAGAACACTGTGATTGTAGGTGACTCTGTGTCATTAACTGAGGGCCTTGTGGGAGAGCTAATGAGAAGGATAGAAAGGTCAGAAGTGCCTGATGAGTTAAAGTCAATCAATTTTATCAAATTCCAGATTTCACCTGTTTCTTTGAGTTGCATGAAAAGAGATGAAGTTGAAATGAAACTCTTGGAACTGAAAAGGAAGGTGAATTCCGTTGCATCAGGAGAAGGGGGTGGCATTTTTTATATTGGAGACCTGAAGTGGACCGTGGAGGAAACAGGTTTCAGTGACAAAGAGGAAGGGTCCCCAGAAGGAGAAATTTCTGGTTACAATCCAGTTGATCATTTAGTTTCGGAAGTTGGAAGGTTATTCTGTGACTGTGGAACCTCAAATAATGCTAAGGTGTGGCTCATGGCCACTGCTAGTTACCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGAAGCAGTGGGCTCTTCAGGCTGTTCCTGTTCCATCAGGTGGACTTGACTTGAGTCTTCAAGCTCCCAGTGTCCTTGATTCAAAGATGACCATCTCCCAAAACCAATCTCCTGTGCCTGAAACAAAGCCCTTCGGTAACATGGAGCAGCAGGATAGGCTCAACTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCCCAATTTCTTAGGCCAGATCAAAAGAAAATGATGCCATTCTGGCTTCGGTCTCATACCACAGAAGACCATAATAAGGATGAATTAGTCCAGTTGAAAAGAAAGTGGAATAGACTATGCCACTGTCTACACCAAAGCAAACAGATTCATAACCCATGCAACTTGAACAACAGTTATAATTCAGCAAGCTCCATATCTTTTGCGAACAATGCGACACATTGCTCCACCCTCAAACTTGTTCCTCGATTCCGGCGCCAACAATCATGCATCATTGAGTTCAATTTCGGCGAGAAAAGGGAAGCAACAGAGCCAGTGTTAGATTCCCAGGAGGGCAAGGAAGGTAAAGAAGTAAAGACTACTCTTGCTCTTGGCAATGGCGGTTCAGGTGAGACGGTGGGGGATATAACTGATGATAGAACACTGCAAAGAGCTCATATTTGTAAACTATTGCAGGAGAATGTGCCATGGCAGTCTGAGACTGTTCCTTCAATAGCAGAAGCCTTGACCGATTCCATATCAGCAAAGCAAAGTAACTATATTACTTGGTTACTAGTGAAAGGTAATGACACCATTGGGAAAAGAAGGTTGGCACTTGCAGTTGCAGAATCAGTTTTTGGCTCAACTGATGTGCTCCTTCAATTTGACATGCTAAAGAGAGAGACTTCAATTGCCCCATTTTCTGAAATGCTGGCAGGAGCGCTGAAAACCCACCAACAGCTTGCGGTGCTAATAGAAAATGTTGACTTTGCTGATGCCCAGTTCAAGAAATTCCTCTCGGATGGGTTTGAAACAGGAAAGTTTGGAAATTCCACAGAAGAGAACTCAAGCCAAGTTATACTCATATTGGCAAGTGGTGGATCCACTAGCATCGAGGAGAAGAAAGAGGAATCGGTTATCAAGTTGTTATGGCAGGTTAGTGAAACCAAGCCTAAGTTAGAGACTCAATCTGTGGCAACTAGGATTATAGAGCCTTGTTTGGGCAATAAAAGAAGGGCTGAACTTGATTTGTTTTCTAACACTGAGAGTTTTCAAGGGAGCAAGAAGAGAGTGTGTTCGAGACAAACAAGCTTTAACACTCTTGATCTGAACATGCAAGCTGATGAAGAGGGGGGTGGGGAGGGTGAAGCAGGAGAAAGTAGCCCTATTTCAAGTGATTTGAGTAGGGAAACTATAGCTGATCCACTGAGACAAAACGGATTTCTTGACTCGATTGGAAACCGGTTTGAGTTTAACACAAGTCCAGTTAAAGACAGAGAGATGGCAGAGTTGTTTTTGTGCAAGATAAAAGGGTGTTTTGAGGAGGTTTGTGGGAAGCAATGTTGGGAGAATTTAAGTGTAGATGAGAGGGTGATTGAGGATGTTTGTTTTGGGTGTGGTTATTTTAGCAACGACCTGTTTGAGAAATGGCTGAAAAATGTTTTTAAAAGCAGCTTAAAAACGGTTAACATTGGAGGGAAGGAGGGTATAGTTTATAGACTTTGTTGGGGTGGTAAAGGAGATACAAAAGATAGTGGCTTCATGAGTTCTTCTCTGCCCAAGAGTATCCAACTTAATTACTTCATAGAGTGA 3009 0.444 MRSGVCALQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRGSSLRKACLKSQPHQSSHPLQCRALELCFNVALNRLPTSPAPLIHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLIIKVELEHLITSILDDPSVSRVMREAGFSSTAVKNNIEDSSPHSVFQCYNSSGGVFSSPCSPSASENHRETTTNPTNFRQTHHFLTSYASEFHPSLVFSPLKSSPACSFSGAASSSKDDIRVVLDILLRKKKKNTVIVGDSVSLTEGLVGELMRRIERSEVPDELKSINFIKFQISPVSLSCMKRDEVEMKLLELKRKVNSVASGEGGGIFYIGDLKWTVEETGFSDKEEGSPEGEISGYNPVDHLVSEVGRLFCDCGTSNNAKVWLMATASYQTYMRCQMRQPPLEKQWALQAVPVPSGGLDLSLQAPSVLDSKMTISQNQSPVPETKPFGNMEQQDRLNCCEECASNYEKEAQFLRPDQKKMMPFWLRSHTTEDHNKDELVQLKRKWNRLCHCLHQSKQIHNPCNLNNSYNSASSISFANNATHCSTLKLVPRFRRQQSCIIEFNFGEKREATEPVLDSQEGKEGKEVKTTLALGNGGSGETVGDITDDRTLQRAHICKLLQENVPWQSETVPSIAEALTDSISAKQSNYITWLLVKGNDTIGKRRLALAVAESVFGSTDVLLQFDMLKRETSIAPFSEMLAGALKTHQQLAVLIENVDFADAQFKKFLSDGFETGKFGNSTEENSSQVILILASGGSTSIEEKKEESVIKLLWQVSETKPKLETQSVATRIIEPCLGNKRRAELDLFSNTESFQGSKKRVCSRQTSFNTLDLNMQADEEGGGEGEAGESSPISSDLSRETIADPLRQNGFLDSIGNRFEFNTSPVKDREMAELFLCKIKGCFEEVCGKQCWENLSVDERVIEDVCFGCGYFSNDLFEKWLKNVFKSSLKTVNIGGKEGIVYRLCWGGKGDTKDSGFMSSSLPKSIQLNYFIE* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1458 1002 Gene3D - 9 168 IPR036628 -
Pvu3g1458 1002 MobiDBLite consensus disorder prediction 845 865 - -
Pvu3g1458 1002 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Pvu3g1458 1002 ProSiteProfiles Clp repeat (R) domain profile. 8 170 IPR004176 -
Pvu3g1458 1002 Gene3D - 605 810 IPR027417 -
Pvu3g1458 1002 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 978 - -
Pvu3g1458 1002 PANTHER PROTEIN SMAX1-LIKE 5 1 978 - -
Pvu3g1458 1002 Pfam Clp amino terminal domain, pathogenicity island component 26 51 IPR004176 -
Pvu3g1458 1002 Pfam Clp amino terminal domain, pathogenicity island component 131 166 IPR004176 -
Pvu3g1458 1002 Gene3D - 240 425 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1458 Pvu-Chr3 33372676 33376480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1458 - - vra:106769441 1702.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1458 3 33372676 33376480 Pvu3g1458 3 33372676 33376480 ECH
Pvu3g1458 3 33372676 33376480 Pvu9g2433 9 34680439 34684961 PCT