Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2424 ATGCACCATTTGCAACAGCTTCATCATCATCATCATCAACCACCCATGATGATGAAGAAGAGGGAGAGAAACAAAGGCATGGAGAAAGAGAGGCTTCAGGTCATGGACTTGAGTGGCATGGCCTTGGACTCTCTTCCCAAACCTTCTCTTGATTTAGCCACCATTTCAAAGTTGAACTTGTCTAATAACAATCTCCAGGAGATTCCTGAATCCTTAACTGCGAGACTGCTAAATGTGGAGGTGTTGGATGTTGGGTCGAACCAGCTGAAGTCTCTTCCGAATTCCATTGGTTGTCTCTCTAAGCTTAAGGTTTTAAATGTCTCTGCCAACTTCATCCAATTCCTTCCCAAAACCATTGAGAATTGCAGAGCATTAGAAGAACTGAATGCAAACTTCAACAAGCTGAGCAAGTTACCAGACACAGTAGGGTTTGAGCTGATAAACCTGAAGAAGCTGTCAGTGAACTCCAACAAGCTGGTTTTTCTTCCAAGCTCAACCTCACACCTAACATCTCTGAAGGTTCTTGATGCACGCTTGAATTGCCTAAGGGAACTTCCGGAGGACCTAGAGAACCTGGTGAACCTTGAGACTCTGAATGTGAGCCAGAACTTCCACTACTTGGAAACCCTCCCTTATTCCATAGGGCTCCTCTTGTCCCTGCTCGAACTTGACCTCAGCTACAACAACATCAAGACCTTGCCTCACTCCATTGGCTGCCTCAAGAACCTCAAGAAGCTCAGTGTTGAAGGGAACCCTTTGGTGTGTCCCTCAATGGAGGTGGTGGAGCAGGGACTGCATGTGGTGATGGAGTACCTGCACCATAAGATGAACTCGAGTGATCAACGTCCAACGAAGAAGAGGTGGTGGATGATGAAGATGGTCAAGTGTGGAACCTTCGATAAACAAGGTAGAGGAGGGAAACGAGGAGAAGGTTACAACATGCTTAAGCATCAGAATATCAACGGTCTTGCTTCGCCGGGCTTCATGGGCATGCTTTCACCCCTTCGGTTCTTCTCGTCGCCCCGCAATTCCTTCAGCTGA 1041 0.4707 MHHLQQLHHHHHQPPMMMKKRERNKGMEKERLQVMDLSGMALDSLPKPSLDLATISKLNLSNNNLQEIPESLTARLLNVEVLDVGSNQLKSLPNSIGCLSKLKVLNVSANFIQFLPKTIENCRALEELNANFNKLSKLPDTVGFELINLKKLSVNSNKLVFLPSSTSHLTSLKVLDARLNCLRELPEDLENLVNLETLNVSQNFHYLETLPYSIGLLLSLLELDLSYNNIKTLPHSIGCLKNLKKLSVEGNPLVCPSMEVVEQGLHVVMEYLHHKMNSSDQRPTKKRWWMMKMVKCGTFDKQGRGGKRGEGYNMLKHQNINGLASPGFMGMLSPLRFFSSPRNSFS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2424 346 Gene3D Ribonuclease Inhibitor 1 143 IPR032675 -
Pvu9g2424 346 Gene3D Ribonuclease Inhibitor 144 274 IPR032675 -
Pvu9g2424 346 ProSiteProfiles Leucine-rich repeat profile. 54 75 IPR001611 GO:0005515
Pvu9g2424 346 ProSiteProfiles Leucine-rich repeat profile. 219 240 IPR001611 GO:0005515
Pvu9g2424 346 SUPERFAMILY L domain-like 32 256 - -
Pvu9g2424 346 MobiDBLite consensus disorder prediction 1 25 - -
Pvu9g2424 346 Pfam Leucine rich repeat 217 253 IPR001611 GO:0005515
Pvu9g2424 346 Pfam Leucine rich repeat 148 203 IPR001611 GO:0005515
Pvu9g2424 346 Pfam Leucine rich repeat 55 110 IPR001611 GO:0005515
Pvu9g2424 346 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 339 - -
Pvu9g2424 346 ProSiteProfiles Leucine-rich repeat profile. 78 99 IPR001611 GO:0005515
Pvu9g2424 346 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 339 - -
Pvu9g2424 346 SMART LRR_typ_2 169 192 IPR003591 -
Pvu9g2424 346 SMART LRR_typ_2 217 240 IPR003591 -
Pvu9g2424 346 SMART LRR_typ_2 99 122 IPR003591 -
Pvu9g2424 346 SMART LRR_typ_2 123 145 IPR003591 -
Pvu9g2424 346 SMART LRR_typ_2 76 98 IPR003591 -
Pvu9g2424 346 SMART LRR_typ_2 146 168 IPR003591 -
Pvu9g2424 346 SMART LRR_typ_2 52 75 IPR003591 -
Pvu9g2424 346 SMART LRR_bac_2 240 258 - -
Pvu9g2424 346 SMART LRR_bac_2 169 188 - -
Pvu9g2424 346 SMART LRR_bac_2 76 95 - -
Pvu9g2424 346 SMART LRR_bac_2 122 141 - -
Pvu9g2424 346 SMART LRR_bac_2 52 71 - -
Pvu9g2424 346 SMART LRR_bac_2 99 118 - -
Pvu9g2424 346 SMART LRR_bac_2 192 213 - -
Pvu9g2424 346 SMART LRR_bac_2 217 236 - -
Pvu9g2424 346 SMART LRR_bac_2 146 165 - -
Pvu9g2424 346 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2424 Pvu-Chr9 34560136 34563925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2424 30 257 Receptor kinase-like Gene Family AT5G46330 27.426 1.46e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2424 - - gmx:100776295 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2424 9 34560136 34563925 Pvu9g2424 9 34560136 34563925 ECH
Pvu3g1449 3 33247599 33251692 Pvu9g2424 9 34560136 34563925 PCT