Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1449 ATGATGTACGAGCAACAGCAACGTTTTCAGCAGCCCATGTCTGTGAAGGTGGATGTGAGGAAGAAAACGGAGAGAAGCAAAGGCACAGAGGAAGAGAGGCTTGAAATAGTAGACTTGAGTGGCATGTCCCTCGACTCCCTTCCTAACCCCTCTCTTAATTTAGCCACCATTTGCAAGTTGGACCTCTCCAATAACAATCTCCAGAATATACCAGAGTCCTTAACAGCGAGACTGCTGAACATGGTGGTGTTGGACGTGCACTCCAACCAGCTTAGGCACCTTCCCAACTCCATTGGCTGCCTCTCTAAACTCAAGGTTTTGAATGTCTCTGGCAACCTCATCGAATACCTTCCCAAAACAATTGAAAATTGCAGAAGCTTAGAAGAACTGAATGCGAACTTCAATAAGTTGATCCAGCTTCCAGAGAACATAGGGTACGAGCTGACAAACCTGAAGAAGCTATCAGTGAACTCGAACAAGCTGGTGTTCCTTCCTCGCTCGACCTCTCACATGACCGCTCTGAAAATTCTGGACGCGCGTTTGAACTGCCTGAGGTCTCTCCCAGAAGATCTCGAGAACCTGATAAACCTAGAAACTCTGAACGTGAGCCAGAACTTCCAGTACCTGGATTCTCTACCCTACTCGGTGGGGCTCCTCCTCTCCCTTGTGGAACTAGACGCCAGCTACAACAAGATCAGATCCTTGCCGGACTCCATCGGGTGCCTCAAGAAGTTGCAGAAGCTGAGCGTGGAAGGGAACCCTCTGAGTTCGCCGCCACCGGAAGTGGTGGAGCAGGGGTTGCATGCGGTGAAGGAGTACCTGTGCCAGAAGATGAACGCGGGCCATCAGAGCCCCACGAAGAAGAAGTCGTGGGTGGGGAGGCTGGTGAAGTATGGCACCTTCAATGGACTCAACAGCAGAGGTGGAATCCGGGAGGAACGTGAAGCGTTCATCATGCCTGATTACAGACCAATCGATAGCCTTGCTTCGCCGCGCTACACCGGCATGTTCTCGACTCGTCGCCTCTTCTCACCCCGCAATTACTTCACCAACTGA 1056 0.5123 MMYEQQQRFQQPMSVKVDVRKKTERSKGTEEERLEIVDLSGMSLDSLPNPSLNLATICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLRHLPNSIGCLSKLKVLNVSGNLIEYLPKTIENCRSLEELNANFNKLIQLPENIGYELTNLKKLSVNSNKLVFLPRSTSHMTALKILDARLNCLRSLPEDLENLINLETLNVSQNFQYLDSLPYSVGLLLSLVELDASYNKIRSLPDSIGCLKKLQKLSVEGNPLSSPPPEVVEQGLHAVKEYLCQKMNAGHQSPTKKKSWVGRLVKYGTFNGLNSRGGIREEREAFIMPDYRPIDSLASPRYTGMFSTRRLFSPRNYFTN* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1449 351 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Pvu3g1449 351 Gene3D Ribonuclease Inhibitor 2 141 IPR032675 -
Pvu3g1449 351 ProSiteProfiles Leucine-rich repeat profile. 56 77 IPR001611 GO:0005515
Pvu3g1449 351 Gene3D Ribonuclease Inhibitor 142 279 IPR032675 -
Pvu3g1449 351 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 4 344 - -
Pvu3g1449 351 MobiDBLite consensus disorder prediction 15 29 - -
Pvu3g1449 351 SUPERFAMILY L domain-like 34 260 - -
Pvu3g1449 351 Pfam Leucine rich repeat 59 114 IPR001611 GO:0005515
Pvu3g1449 351 PANTHER LEUCINE-RICH REPEAT-CONTAINING 4 344 - -
Pvu3g1449 351 SMART LRR_typ_2 242 265 IPR003591 -
Pvu3g1449 351 SMART LRR_typ_2 54 77 IPR003591 -
Pvu3g1449 351 SMART LRR_typ_2 125 147 IPR003591 -
Pvu3g1449 351 SMART LRR_typ_2 148 170 IPR003591 -
Pvu3g1449 351 SMART LRR_typ_2 219 241 IPR003591 -
Pvu3g1449 351 SMART LRR_typ_2 171 194 IPR003591 -
Pvu3g1449 351 SMART LRR_typ_2 101 124 IPR003591 -
Pvu3g1449 351 SMART LRR_typ_2 78 100 IPR003591 -
Pvu3g1449 351 SMART LRR_bac_2 124 143 - -
Pvu3g1449 351 SMART LRR_bac_2 219 238 - -
Pvu3g1449 351 SMART LRR_bac_2 101 120 - -
Pvu3g1449 351 SMART LRR_bac_2 148 167 - -
Pvu3g1449 351 SMART LRR_bac_2 54 73 - -
Pvu3g1449 351 SMART LRR_bac_2 173 190 - -
Pvu3g1449 351 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1449 Pvu-Chr3 33247599 33251692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1449 52 265 Receptor kinase-like Gene Family AT5G51350 32.287 8.48e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1449 - - gmx:100783239 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1449 3 33247599 33251692 Pvu3g1449 3 33247599 33251692 ECH
Pvu3g1449 3 33247599 33251692 Pvu9g2424 9 34560136 34563925 PCT