Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2420 ATGATCAAAGGTAAAGACGTGTATGATGTAGTGGCAGTTATTGTGCCCCTCTACGTGGCTCTGTTCTTAGCATATGGCTCTGTCCGTTGGTGGAAGATCTTCACACCAGAACAGTGTTCTGGTATAAACCGTTTTGTGTCGGTTTTTGCAGTGCCCTTTCTCTCCTTCCATTTCATATCCAACAACAACCCTTACACCATGAACTTCAGGTTCTTAGCCGCGGACTCTCTTCAAAAGGTTGTGATTTTGGTTGCACTTGTTCTGTGGAACAGTTTGACAAAGTGGGGTAGCATTAACTGGACCATCACTCTGTTCTCACTCTCCACTCTCCCCAACACACTCATCATGGGGGTTCCTCTTCTCAAAGCCATGTATGGAGACTTCACAGCCACCCTCATGATCCAAATTGTGGTTTTCCAAAGTGTCATTTGGTACACTCTCTTGCTGTTCATGTTTGAATACAGAGGAGCCAAGCTGCTGATTCTGGAGAAATTCCCTGATACTGCAGGGGCTATATCCTCTGTTTGGGTTGATTCAAATGTTGATTCTCTGAGTGACAGGAAGATACTAGAAACTAATGCAGAAGCAGGAGAAGATGGGAATCTTCGTGTGGTGGTGAGGAGCATGTCACGTTCTGTGTCCATTGCATCAAACCTCACTGGGATTGAGATCCATTCGATGGAATCGTCTAGAGAACCAAGGCTGAAAAATTCAAATTATAGTGCTACAGATTTGCACCCTCGTGGTCCCAAAAGAGAAAGCATGTTGAAAATGCATGAGAAAAGTTTTCCAAGAAGCAAAAGTGTTGGTTATGATTTGGTTTCTTATCCGTCTCTAAAACCAATAGGGCAAAAGGAGACTAATAGGAACAAGGTTTTAAACATGTTCGAGTTGAGTTCAAGTGCAATTTCACCAACTTCTGATCCTAATGTGAGACATGAAGCAGATAATAGAGTTGGGTATTATGAGTTTGAGACCATGGAATCTTCAAAGGGTGTTGATTTTGCAAGCGAAACTACTCCATCAAAAGTTGTGCATGAAGATATTGAAATTGAAGGTCTTAAAGATCCTGTATTAGGGAGTCATCATATGAATGAGAACATTGAAAGAGATTCAAATAGAAGGCAAGAAATGCCTCGTGCTAGTGTTATGATAAAGCTTATTCTCACCATGGTTTGGAGGAATCTCATGAGAAACCCTAATACATATGCAAGTGTTTCGGGTCTTGTTTGGTCTCTCATATTTTTTAAGTATTTCTTCCACCTCTTTAATTGCTTTCTAACGTGTTTATTCATGGCATTACAACCTAAAATCATTACTTGTGGAAAAACTCAAGCTATGATTTCAATGGTAATTAAGTTCTTGGTTGGTCCCATAGTGATGCTTGCAACCTCAAAAGCCATGGGTATCAATGGAGTTCTTTTAAAGGTTGCAATTGTTCAGGCTTCTCTTCCAGAGGCTATTGTTCCTTTTGTTTTTGCCAAAGAATATAATCTCCATGCAAACATACTAAGCACAGCGGTTATCTTCGGAATGGTGGCTGCATTACCCGTAACAATAATCTACTACGTGATTCTTGAATTCTAA 1587 0.4058 MIKGKDVYDVVAVIVPLYVALFLAYGSVRWWKIFTPEQCSGINRFVSVFAVPFLSFHFISNNNPYTMNFRFLAADSLQKVVILVALVLWNSLTKWGSINWTITLFSLSTLPNTLIMGVPLLKAMYGDFTATLMIQIVVFQSVIWYTLLLFMFEYRGAKLLILEKFPDTAGAISSVWVDSNVDSLSDRKILETNAEAGEDGNLRVVVRSMSRSVSIASNLTGIEIHSMESSREPRLKNSNYSATDLHPRGPKRESMLKMHEKSFPRSKSVGYDLVSYPSLKPIGQKETNRNKVLNMFELSSSAISPTSDPNVRHEADNRVGYYEFETMESSKGVDFASETTPSKVVHEDIEIEGLKDPVLGSHHMNENIERDSNRRQEMPRASVMIKLILTMVWRNLMRNPNTYASVSGLVWSLIFFKYFFHLFNCFLTCLFMALQPKIITCGKTQAMISMVIKFLVGPIVMLATSKAMGINGVLLKVAIVQASLPEAIVPFVFAKEYNLHANILSTAVIFGMVAALPVTIIYYVILEF* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2420 528 MobiDBLite consensus disorder prediction 227 251 - -
Pvu9g2420 528 Pfam Membrane transport protein 427 523 IPR004776 GO:0016021|GO:0055085
Pvu9g2420 528 Pfam Membrane transport protein 10 418 IPR004776 GO:0016021|GO:0055085
Pvu9g2420 528 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 267 527 - -
Pvu9g2420 528 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 246 - -
Pvu9g2420 528 TIGRFAM 2a69: auxin efflux carrier 1 526 IPR014024 -
Pvu9g2420 528 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 267 527 IPR033526 GO:0010315|GO:0010329
Pvu9g2420 528 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 246 IPR033526 GO:0010315|GO:0010329
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2420 Pvu-Chr9 34528427 34531594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2420 1 519 Organic Solute Cotransporters AT1G73590 45.645 3.45e-162 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2420 K13947 - gmx:100788935 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2420 9 34528427 34531594 Pvu9g2420 9 34528427 34531594 ECH
Pvu3g1447 3 33224000 33227068 Pvu9g2420 9 34528427 34531594 PCT