Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1447 ATGATAACCGTTAAGGATATTTATGATGTTTTCGCGGCTATTGTGCCCCTGTACGTGGCTATGATATTAGCATATGGTTCAGTTCGGTGGTGGAAAATTTTCACACCTGATCAGTGTTCAGGTATAAACCGCTTTGTCGCCGTGTTCGCAGTTCCACTGCTTAGTTTCCACTTCATCTCCTCCAATGACCCTTATGCTATGAACTACCACTTCATAGCAGCTGATTGTCTTCAAAAAGTTGTCATTCTGGGTGCTCTCTTTCTATGGAACACCTTCACAAAACATGGCAGCCTAGACTGGACCATCACCCTGTTCTCTCTTTCCACTCTTCCAAACACCCTTGTCATGGGGATCCCTCTATTGAAGGCCATGTATGGGGACTTTTCAGGGAGCCTCATGGTTCAAATTGTGGTGTTGCAAAGTGTCATATGGTACACTCTCATGTTGTTCTTGTTTGAATATAGAGGTGCCAAACTCCTCATAACGGAACAGTTCCCTGAGACTGCAGGCTCCATCACCTCCTTCAGGGTTGACTCAGATGTTGTCTCACTCAATGGTAGGGAGGCACTGCAAACTGATGCTGAGATAGGAGAAGATGGAAAGCTCCATGTGGTGGTTAAGAGATCAGCAGCTTCTTCCATGATATCTTCCTTCAACAAATCCCATTTAACTTCTATGACTCCTAGAGCATCTAATCTCACTGGGGTTGAGATCTATTCCGTTCAGTCATCAAGAGAACCAACCCCAAGAGCTTCAAGTTTCAATCAAACAGACTTTTATGCCATGTTTGCAAGCAAGGCACCGAGTCCAAAGCATGGCTACACAAACAGTTTCCAGAGTAACAGTGGTATTGGTGATGTTTACTCGCTGCAATCTTCCAAGGGGCCAACACCAAGGACTTCTAACTTTGAAGAGGAGATGTTGAAGATGCAGAAAAAGAGAGGCGGGAGGAGCATGAGTGGAGAGTTGTTTAATGGAGGTTTGGTTTCTTCTTACCCACCTCCTAATCCAATGTTTTCAGGGTCTACAAGCGCTGGTGGCCCAAAAAAGAAAGATACTGCCGCTGCTGCACCTAACAAGGAGTTACACATGTTTGTTTGGAGTTCAAGTGCATCACCAGTTTCCGAGGGAAATTTGAGGCATGCAGTTAATAGAGCTGCCTCTACCGACTTTGGGACTGTTGATCCTTCTAAGGCTGTTCCACACGAAACTGTTGCTTCCAAAGCTGTTCAAGAATTGATTGAGAACATGAGTCCTGGTCGTAGAGGGAGCGGAGAGAAGGAGCTTGAAATGGATGAGGGAGCCAAATATCCCACAAGTGGATCTCCATACACCAGCCAGAAGAAGGTGGATTTGGAAGGCAATGCAAACAAAAACCAACAGATGCCACCTGCAAGTGTCATGACAAGACTCATCCTCATCATGGTCTGGAGAAAACTCATAAGAAATCCTAATACCTACTCTAGTCTTTTGGGACTCGCATGGTCTCTCATATCATTTAGGTGGCACATTGAAATGCCAACTATTGTAAAAGGTTCCATCTCAATACTGTCTGATGCTGGTCTTGGAATGGCCATGTTCAGTCTAGGTCTGTTCATGGCATTACAACCCAAGATCATTGCCTGTGGAAAATCTGTGGCAGCATTTTCTATGGCTGTAAGGTTCTTGACAGGTCCAGCTGTTATTGCTGCAACCTCCATAGGCATTGGACTCCGTGGAGTTCTTTTGCATATTGCAATTGTCCAGGCTGCCCTTCCCCAAGGTATCGTTCCCTTTGTGTTTGCCAAAGAATACAATCTCCACGCAGATATACTTAGCACTGCGGTTATATTTGGAATGCTGGTTGCATTGCCCATAACCATACTCTACTACGTGCTGCTTGGACTCTAA 1890 0.4513 MITVKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFIAADCLQKVVILGALFLWNTFTKHGSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKLLITEQFPETAGSITSFRVDSDVVSLNGREALQTDAEIGEDGKLHVVVKRSAASSMISSFNKSHLTSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAPSPKHGYTNSFQSNSGIGDVYSLQSSKGPTPRTSNFEEEMLKMQKKRGGRSMSGELFNGGLVSSYPPPNPMFSGSTSAGGPKKKDTAAAAPNKELHMFVWSSSASPVSEGNLRHAVNRAASTDFGTVDPSKAVPHETVASKAVQELIENMSPGRRGSGEKELEMDEGAKYPTSGSPYTSQKKVDLEGNANKNQQMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLAWSLISFRWHIEMPTIVKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIGIGLRGVLLHIAIVQAALPQGIVPFVFAKEYNLHADILSTAVIFGMLVALPITILYYVLLGL* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1447 629 MobiDBLite consensus disorder prediction 336 355 - -
Pvu3g1447 629 Pfam Membrane transport protein 10 624 IPR004776 GO:0016021|GO:0055085
Pvu3g1447 629 TIGRFAM 2a69: auxin efflux carrier 1 629 IPR014024 -
Pvu3g1447 629 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 629 IPR033526 GO:0010315|GO:0010329
Pvu3g1447 629 MobiDBLite consensus disorder prediction 413 449 - -
Pvu3g1447 629 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1447 Pvu-Chr3 33224000 33227068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1447 102 629 Organic Solute Cotransporters AT5G57090 74.819 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1447 K13947 - gmx:100305383 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1447 3 33224000 33227068 Pvu3g1447 3 33224000 33227068 ECH
Pvu3g1447 3 33224000 33227068 Pvu9g2420 9 34528427 34531594 PCT