Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2398 ATGACTCCAACACCTTCTTCAGTTTATGCTCTCATGGCAACTTGGTTCACACCCTCCTATCTCTTCATCTTCATCAACCTTGTCATCGGCACCATAGCCATCACCTCTCGTTTCACCAACACAACCAAACGCCAACGCCAACACCAACTCCTCCGTTCTCCCTCTTTGTTAGACCGCTTCTCATCCTTCCGTTATCACAAACATGAACCGACACCAACGTTAACGCCTCACAACGTTGCTCTGGAGCCTGTCCGGACTCTAGAATCGCCGCCGGCGGTTTCGATCATCTCCTTCGGTCCCAGTTTAGATACGCCTGAGATCGAAGAAGATGATCAAATTCAGAGTAATAATTCACCCCAGTTGGACCGGGTTCCCTCTTCGTCGTCGTTGTTAGACCGGATTAGGTCTTTTAGTTTTCATAAAGAAAGGGAAAGATCTGAGCCGGTCCAAAATCCTGATATTGGAATGAAGCTGGTTCGAACTCCATCTTTAATGGAGCGTGTGAGGTGTTTTAGTCTGGATTTGTGTAAAGTCCAGAATGAAAGCTGTGACTCCGTTGAGCAGCCATTGAGCCGTGCTCCTTCCTTCCTCCAGCGGCTCAAGTCGTTGAGTTTTAACAGATCGGAGTCGGAAAGTGAGGTGGCGGACGGTGGGGAGTTGGTGGAGGAGAGGGAAGGAGAGGAAGGGGTGGACGCCAAGGCTGATGATTTCATCAACAGGTTTAGGCAGCAACTGAGGTTGCAAAGGCTTGACTCTATTCTACGTTGCAGGGATATGCTGAGAGGAAGCTCATAA 795 0.4918 MTPTPSSVYALMATWFTPSYLFIFINLVIGTIAITSRFTNTTKRQRQHQLLRSPSLLDRFSSFRYHKHEPTPTLTPHNVALEPVRTLESPPAVSIISFGPSLDTPEIEEDDQIQSNNSPQLDRVPSSSSLLDRIRSFSFHKERERSEPVQNPDIGMKLVRTPSLMERVRCFSLDLCKVQNESCDSVEQPLSRAPSFLQRLKSLSFNRSESESEVADGGELVEEREGEEGVDAKADDFINRFRQQLRLQRLDSILRCRDMLRGSS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2398 264 PANTHER DUF4408 DOMAIN PROTEIN 224 262 - -
Pvu9g2398 264 PANTHER DUF4408 DOMAIN PROTEIN 6 79 - -
Pvu9g2398 264 PANTHER COTTON FIBER (DUF761) 224 262 - -
Pvu9g2398 264 PANTHER COTTON FIBER (DUF761) 6 79 - -
Pvu9g2398 264 MobiDBLite consensus disorder prediction 106 128 - -
Pvu9g2398 264 Pfam Cotton fibre expressed protein 228 261 IPR008480 -
Pvu9g2398 264 Pfam Domain of unknown function (DUF4408) 7 38 IPR025520 -
Pvu9g2398 264 MobiDBLite consensus disorder prediction 111 128 - -
Pvu9g2398 264 MobiDBLite consensus disorder prediction 208 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2398 Pvu-Chr9 34246699 34248131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2398 - - vra:106761585 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1416 3 32832106 32833438 Pvu9g2398 9 34246699 34248131 PCT